RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PRRX1P54821 245 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 LOXL3P58215 753 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 MRPS10P82664 201 aaKnown RBP15.34■□□□□ 0.05
RAB40C-207ENST00000563109 Q3ZCU0 254 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 MIDNQ504T8 468 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 ZNF626Q68DY1 528 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 FAM131AQ6UXB0 335 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 HOGA1Q86XE5 327 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 BEST4Q8NFU0 473 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 OR10V1Q8NGI7 309 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 LEAP2Q969E1 77 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 SLC23A1Q9UHI7 598 aa15.34■□□□□ 0.05
RAB40C-207ENST00000563109 MEIOCA2RUB1 952 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 ODF3BA8MYP8 253 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 DIRAS3O95661 229 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 GSTT2P0CG29 244 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 GSTT2BP0CG30 244 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 ZBTB25P24278 435 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 SAA4P35542 130 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 ARPC4P59998 168 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 SPANXN2Q5MJ10 180 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 OR52L2PQ8NGH6 319 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 OR6Q1Q8NGQ2 317 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 GPX8Q8TED1 209 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 PTTG2Q9NZH5 202 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 ZNF69Q9UC07 566 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 ANXA10Q9UJ72 324 aa15.33■□□□□ 0.04
RAB40C-207ENST00000563109 TBL2Q9Y4P3 447 aaKnown RBP15.33■□□□□ 0.04
RAB40C-207ENST00000563109 AMMECR1Q9Y4X0 333 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-207ENST00000563109 BET1O15155 118 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 IGHV3-7P01780 117 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 CTXN2P0C2S0 81 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 FAM157CP0CG43 387 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 PPP1CCP36873 323 aaKnown RBP15.32■□□□□ 0.04
RAB40C-207ENST00000563109 GNMTQ14749 295 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 RNASE12Q5GAN4 147 aaKnown RBP15.32■□□□□ 0.04
RAB40C-207ENST00000563109 C9orf139Q6ZV77 190 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 C5orf24Q7Z6I8 188 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 GVQW1Q8N7I0 195 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 BEND2Q8NDZ0 799 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 OR10X1Q8NGY0 326 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 FCAMRQ8WWV6 532 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 CREB3L1Q96BA8 519 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 ABHD1Q96SE0 405 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 GINS4Q9BRT9 223 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 CABLES2Q9BTV7 478 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 PSG11Q9UQ72 335 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 FAM96BQ9Y3D0 163 aa15.32■□□□□ 0.04
RAB40C-207ENST00000563109 J3QR06 171 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 YPEL1O60688 119 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 RCVRNP35243 200 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 ACTBP60709 375 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 ACTG1P63261 375 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 HLA-DRB5Q30154 266 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 IGSF11Q5DX21 431 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 MINOS1Q5TGZ0 78 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 CCDC190Q86UF4 302 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 C8orf31Q8N9H6 132 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 OR2AK2Q8NG84 335 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 OR10J5Q8NHC4 309 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 C22orf15Q8WYQ4 148 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 YPEL2Q96QA6 119 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 MMP28Q9H239 520 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 OR1A1Q9P1Q5 309 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 ANAPC10Q9UM13 185 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 MINOS1-NBL1R4GNA1 71 aa15.31■□□□□ 0.04
RAB40C-207ENST00000563109 IGKV1D-8A0A087WSZ0 117 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 GABARAPH6UMI1 98 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 CTDSPLO15194 276 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 FCER2P06734 321 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 IL3RAP26951 378 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 HTR1DP28221 377 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 CEACAM3P40198 252 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 TAS2R46P59540 309 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 HERPUD1Q15011 391 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 MORN2Q502X0 79 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 LY6G6FQ5SQ64 297 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 OR52I2Q8NH67 350 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 EDARADDQ8WWZ3 215 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 ABHD14AQ9BUJ0 271 aa15.3■□□□□ 0.04
RAB40C-207ENST00000563109 IGKV1-6A0A0C4DH72 117 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 A0A0U1RQK1 487 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 A0A1W2PPE3 182 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 RBBP9O75884 186 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 IGLV1-47P01700 117 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 FBP1P09467 338 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 PTBP1P26599 531 aaKnown RBP eCLIP15.29■□□□□ 0.04
RAB40C-207ENST00000563109 CEACAM6P40199 344 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 PYDC2Q56P42 97 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 UTF1Q5T230 341 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 FAM53AQ6NSI3 398 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-207ENST00000563109 LINC00311Q8N616 119 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 OR4P4Q8NGL7 312 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 SMIM4Q8WVI0 70 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 SNAPC3Q92966 411 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 SLC6A7Q99884 636 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 NECAP2Q9NVZ3 263 aa15.29■□□□□ 0.04
RAB40C-207ENST00000563109 SONP18583 2426 aaKnown RBP15.29■□□□□ 0.04
RAB40C-207ENST00000563109 TRBV6-7A0A0A0MS04 114 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms