RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 FAM71E2Q8N5Q1 922 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 ZNF555Q8NEP9 628 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 PRR25Q96S07 402 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 ETAA1Q9NY74 926 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 GNG12Q9UBI6 72 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
USP3-220ENST00000561381 EXOSC1Q9Y3B2 195 aaKnown RBP9.1□□□□□ -0.95
USP3-220ENST00000561381 PEX16Q9Y5Y5 336 aa9.1□□□□□ -0.95
USP3-220ENST00000561381 RYR3Q15413 4870 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 UBE2QL1A1L167 161 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SPINT2O43291 252 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 MAS1P04201 325 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 ELANEP08246 267 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SLC2A2P11168 524 aaPredicted RBP9.09□□□□□ -0.95
USP3-220ENST00000561381 FSTP19883 344 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 MYF6P23409 242 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SOX6P35712 828 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 CDX1P47902 265 aaPredicted RBP9.09□□□□□ -0.95
USP3-220ENST00000561381 TNP2Q05952 138 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 GPR176Q14439 515 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 YIF1BQ5BJH7 314 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 AWAT2Q6E213 333 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SIGIRRQ6IA17 410 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 OR8U1Q8NH10 309 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 RITA1Q96K30 269 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 KCTD7Q96MP8 289 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 WWC2-AS2Q96NR7 200 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 SPACA1Q9HBV2 294 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 CKLFQ9UBR5 152 aa9.09□□□□□ -0.95
USP3-220ENST00000561381 IRGMA1A4Y4 181 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
USP3-220ENST00000561381 IGHG4P01861 327 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 MGMTP16455 207 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 VDAC1P21796 283 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 CNTFRP26992 372 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 PSMB8P28062 276 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 LSAMPQ13449 338 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 Q3ZCU0 254 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 C6orf183Q5T699 404 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 C10orf67Q8IYJ2 551 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 GAPTQ8N292 157 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 OR8H1Q8NGG4 311 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 OR52L2PQ8NGH6 319 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 OR5M8Q8NGP6 311 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 CYGBQ8WWM9 190 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 GGHQ92820 318 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 TMEM80Q96HE8 168 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 RDH12Q96NR8 316 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 DERL3Q96Q80 235 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 GON7Q9BXV9 100 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 KLK15Q9H2R5 256 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 TAF9BQ9HBM6 251 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 OR2S2Q9NQN1 319 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 ZNF107Q9UII5 783 aaPredicted RBP9.08□□□□□ -0.96
USP3-220ENST00000561381 SCOCQ9UIL1 159 aa9.08□□□□□ -0.96
USP3-220ENST00000561381 LSM4Q9Y4Z0 139 aaKnown RBP9.08□□□□□ -0.96
USP3-220ENST00000561381 SEC14L6B5MCN3 397 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 G3V318 75 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 TXNL1O43396 289 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 LANCL1O43813 399 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 RAMP3O60896 148 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 CRTAPO75718 401 aaPredicted RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 SC5DO75845 299 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 IGF1P05019 195 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 PPP1CCP36873 323 aaKnown RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 ECI1P42126 302 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 ST3GAL4Q11206 333 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 KIAA0141Q14154 515 aaPredicted RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 MMDQ15546 238 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 MORN2Q502X0 79 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 NKAPLQ5M9Q1 402 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 LAIR2Q6ISS4 152 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 ODF3L1Q8IXM7 274 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 FAM46BQ96A09 425 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 MRPS24Q96EL2 167 aaKnown RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 Q96M66 194 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 MRPL20Q9BYC9 149 aaKnown RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 CHCHD3Q9NX63 227 aaKnown RBP9.07□□□□□ -0.96
USP3-220ENST00000561381 WSB1Q9Y6I7 421 aa9.07□□□□□ -0.96
USP3-220ENST00000561381 ATP6V0E1O15342 81 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 FUT3P21217 361 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 CAPGP40121 348 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 OR3A3P47888 321 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 GP2P55259 537 aaKnown RBP9.06□□□□□ -0.96
USP3-220ENST00000561381 ACTBP60709 375 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 DCTN2Q13561 401 aaKnown RBP9.06□□□□□ -0.96
USP3-220ENST00000561381 FHL3Q13643 280 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 INSL4Q14641 139 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 ZNF260Q3ZCT1 412 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 ASPHD1Q5U4P2 390 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 STEAP3Q658P3 488 aa9.06□□□□□ -0.96
USP3-220ENST00000561381 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms