RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 HINT1P49773 126 aaPredicted RBP1.27□□□□□ -2.21
USP8-218ENST00000561330 EMP2P54851 167 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 UBE2KP61086 200 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 SLC35A2P78381 396 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 PDGFRLQ15198 375 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 BSXQ3C1V8 233 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 OR11H1Q8NG94 326 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 MRAP2Q96G30 205 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 OR51E2Q9H255 320 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 C16orf95Q9H693 158 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 NDUFB11Q9NX14 153 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 NXT1Q9UKK6 140 aaKnown RBP1.27□□□□□ -2.21
USP8-218ENST00000561330 RBMX2Q9Y388 322 aaKnown RBP1.27□□□□□ -2.21
USP8-218ENST00000561330 COL4A1P02462 1669 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 RP1L1Q8IWN7 2480 aaPredicted RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 ABCB11O95342 1321 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 A0A1B0GW15 77 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 ARRDC5A6NEK1 342 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 POLR3GO15318 223 aaPredicted RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 LY6HO94772 140 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 CDK14O94921 469 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 PPP1CCP36873 323 aaKnown RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 HENMT1Q5T8I9 393 aaKnown RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 OR4X2Q8NGF9 303 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 OR2Y1Q8NGV0 311 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 MND1Q9BWT6 205 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 C1QTNF6Q9BXI9 259 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 PECRQ9BY49 303 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 GOLPH3Q9H4A6 298 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 DMAC2Q9NW81 257 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 ALG5Q9Y673 324 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 ATG2BQ96BY7 2078 aa1.26□□□□□ -2.21
USP8-218ENST00000561330 YLPM1P49750 1951 aaKnown RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
USP8-218ENST00000561330 MYO15BQ96JP2 1530 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 TNIKQ9UKE5 1360 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 DHRS12A0PJE2 317 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 SLC25A16P16260 332 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 DYNLL1P63167 89 aaKnown RBP1.25□□□□□ -2.21
USP8-218ENST00000561330 ZBTB6Q15916 424 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 TPRXLQ17RH7 258 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 C18orf21Q32NC0 220 aaPredicted RBP1.25□□□□□ -2.21
USP8-218ENST00000561330 RASL11AQ6T310 242 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 MRPL52Q86TS9 123 aaKnown RBP1.25□□□□□ -2.21
USP8-218ENST00000561330 CDRT4Q8N9R6 151 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 LRRC20Q8TCA0 184 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 LRRC39Q96DD0 335 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 CDCA4Q9BXL8 241 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 MRPL32Q9BYC8 188 aaKnown RBP1.25□□□□□ -2.21
USP8-218ENST00000561330 RAB1BQ9H0U4 201 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 GTSF1LQ9H1H1 148 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 SNX24Q9Y343 169 aa1.25□□□□□ -2.21
USP8-218ENST00000561330 RAB3GAP2Q9H2M9 1393 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 TRGV2A0A075B6R0 118 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 UBFD1O14562 309 aaKnown RBP1.24□□□□□ -2.21
USP8-218ENST00000561330 PEBP1P30086 187 aaKnown RBP1.24□□□□□ -2.21
USP8-218ENST00000561330 RCVRNP35243 200 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 NUP62P37198 522 aaPredicted RBP1.24□□□□□ -2.21
USP8-218ENST00000561330 ACTR1BP42025 376 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 CARD18P57730 90 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 XIAPP98170 497 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 AHSA2Q719I0 299 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 ST13P4Q8IZP2 240 aaPredicted RBP1.24□□□□□ -2.21
USP8-218ENST00000561330 ANGPTL6Q8NI99 470 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 ZNF426Q9BUY5 554 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 ZNF471Q9BX82 626 aaPredicted RBP1.24□□□□□ -2.21
USP8-218ENST00000561330 PRRG3Q9BZD7 231 aa1.24□□□□□ -2.21
USP8-218ENST00000561330 H3BPC8 53 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 J3QQQ9 107 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 CYTH3O43739 400 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 NAPSAO96009 420 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 ESDP10768 282 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 GADD45AP24522 165 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 SULT1A2P50226 295 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 RPL26P61254 145 aaKnown RBP1.23□□□□□ -2.21
USP8-218ENST00000561330 TIMM23BQ5SRD1 257 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 AGTRAPQ6RW13 159 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 Q6ZRN7 208 aaPredicted RBP1.23□□□□□ -2.21
USP8-218ENST00000561330 LRRC6Q86X45 466 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 C10orf126Q8N4M7 172 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 ZNF283Q8N7M2 679 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 TMEM239Q8WW34 195 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 TMIGD2Q96BF3 282 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 MED18Q9BUE0 208 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 MAT2BQ9NZL9 334 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 TMEM216Q9P0N5 145 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 DOK5Q9P104 306 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 RPL26L1Q9UNX3 145 aaKnown RBP1.23□□□□□ -2.21
USP8-218ENST00000561330 CR1P17927 2039 aa1.23□□□□□ -2.21
USP8-218ENST00000561330 IGHV3-15A0A0B4J1V0 119 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 SNAP29O95721 258 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 TNNC1P63316 161 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 FLOT2Q14254 428 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 CENPWQ5EE01 88 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 SLC35F6Q8N357 371 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 YIPF7Q8N8F6 280 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 NAA38Q9BRA0 125 aaKnown RBP1.22□□□□□ -2.21
USP8-218ENST00000561330 SPZ1Q9BXG8 430 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 C11orf1Q9H5F2 150 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 METTL17Q9H7H0 456 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms