RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 LINC00311Q8N616 119 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 OR10X1Q8NGY0 326 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 SETD6Q8TBK2 473 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 TOMM40LQ969M1 308 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 RPEQ96AT9 228 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 CHMP1AQ9HD42 196 aaPredicted RBP9.69□□□□□ -0.86
USP8-212ENST00000560730 OR2S2Q9NQN1 319 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 GNG12Q9UBI6 72 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
USP8-212ENST00000560730 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
USP8-212ENST00000560730 TRBV6-6A0A0A6YYG2 114 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 A0A1W2PPI3 338 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 OOSP1A8MZH6 123 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 RAB27BO00194 218 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 TIMM23O14925 209 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 SMIM18P0DKX4 95 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 RAB6AP20340 208 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 PPP1CCP36873 323 aaKnown RBP9.68□□□□□ -0.86
USP8-212ENST00000560730 REG1BP48304 166 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 HABP2Q14520 560 aaPredicted RBP9.68□□□□□ -0.86
USP8-212ENST00000560730 HMGN3Q15651 99 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 MORN2Q502X0 79 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 SFXN4Q6P4A7 337 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 Q6ZS46 218 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 SLC25A48Q6ZT89 311 aaKnown RBP9.68□□□□□ -0.86
USP8-212ENST00000560730 ZNF554Q86TJ5 538 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 C8orf31Q8N9H6 132 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 OR10R2Q8NGX6 335 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 ST6GALNAC6Q969X2 333 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
USP8-212ENST00000560730 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 ZNF702PQ9H963 129 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 RAB18Q9NP72 206 aa9.68□□□□□ -0.86
USP8-212ENST00000560730 WNK1Q9H4A3 2382 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 AIREO43918 545 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 GNB3P16520 340 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 BRS3P32247 399 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 RANBP1P43487 201 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 KIR2DS4P43632 304 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 LSM3P62310 102 aaKnown RBP9.67□□□□□ -0.86
USP8-212ENST00000560730 BLCAPP62952 87 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 CCDC144NLQ6NUI1 221 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 DRAM1Q8N682 238 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 OR4C13Q8NGP0 309 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 OR56B4Q8NH76 319 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 CAPSLQ8WWF8 208 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 IL1F10Q8WWZ1 152 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 CFHR4Q92496 578 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 GALMQ96C23 342 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 RAB3CQ96E17 227 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 CMSS1Q9BQ75 279 aaKnown RBP9.67□□□□□ -0.86
USP8-212ENST00000560730 ATG5Q9H1Y0 275 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 Q9N2K0 584 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 VCX3AQ9NNX9 186 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 PITPNC1Q9UKF7 332 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 ELF5Q9UKW6 265 aaPredicted RBP9.67□□□□□ -0.86
USP8-212ENST00000560730 ANK2Q01484 3957 aa9.67□□□□□ -0.86
USP8-212ENST00000560730 A0A075B6Q4 140 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 MFNGO00587 321 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 HSD17B6O14756 317 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 SNRNP70P08621 437 aaKnown RBP9.66□□□□□ -0.86
USP8-212ENST00000560730 MNDAP41218 407 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 HTD2P86397 168 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 ZNF816Q0VGE8 651 aaPredicted RBP9.66□□□□□ -0.86
USP8-212ENST00000560730 TMEM30BQ3MIR4 351 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 Q3ZCU0 254 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 OR5H6Q8NGV6 325 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 LGALS14Q8TCE9 139 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 PTX4Q96A99 478 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 NPFFR1Q9GZQ6 430 aa9.66□□□□□ -0.86
USP8-212ENST00000560730 PARP12Q9H0J9 701 aaKnown RBP9.66□□□□□ -0.86
USP8-212ENST00000560730 RIMS4Q9H426 269 aaPredicted RBP9.66□□□□□ -0.86
USP8-212ENST00000560730 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 METTL21EPA6NDL7 271 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 YPEL1O60688 119 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 GAPDHP04406 335 aaKnown RBP9.65□□□□□ -0.86
USP8-212ENST00000560730 AMY1AP04745 511 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 AMY2AP04746 511 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 SCTP09683 121 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 HIST1H1DP16402 221 aaKnown RBP9.65□□□□□ -0.86
USP8-212ENST00000560730 RPS19P39019 145 aaKnown RBP9.65□□□□□ -0.86
USP8-212ENST00000560730 RAB7AP51149 207 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 ARHGDIBP52566 201 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 MOB1BQ7L9L4 216 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 MOB3BQ86TA1 216 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 THNSL2Q86YJ6 484 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 Q8N2B8 174 aa9.65□□□□□ -0.86
USP8-212ENST00000560730 RTN4IP1Q8WWV3 396 aaPredicted RBP9.65□□□□□ -0.86
USP8-212ENST00000560730 YPEL2Q96QA6 119 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms