RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-208ENST00000560371 ATP1A1-AS1Q5TC04 95 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 TRAV8-7A0A075B6U6 113 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 C10orf111Q8N326 155 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 NOL4LQ96MY1 436 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-208ENST00000560371 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 INHBBP09529 407 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 GBF1Q92538 1859 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 C9orf172C9J069 976 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 J3QR06 171 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 GREM1O60565 184 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 SPINK4O60575 86 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 NSUN5P2Q63ZY6 315 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 MRGPRGQ86SM5 289 aa11.72□□□□□ -0.53
TRAF3-208ENST00000560371 H3BVH4 76 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 COX6A1P12074 109 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 SPCS3P61009 180 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 IL24Q13007 206 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 C2CD4CQ8TF44 421 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 NAT2P11245 290 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
TRAF3-208ENST00000560371 HLA-GP17693 338 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 IL11P20809 199 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 FAM78BQ5VT40 261 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 LOC101059948A0A1B0GTJ6 334 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 C19orf57Q0VDD7 668 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 Q9N2K0 584 aa11.71□□□□□ -0.53
TRAF3-208ENST00000560371 ADAP1O75689 374 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 SLC6A1P30531 599 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 MVDP53602 400 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 RNFT1Q5M7Z0 435 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 WFDC3Q8IUB2 231 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.54
TRAF3-208ENST00000560371 HELTA6NFD8 242 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 ASAH2BP0C7U1 165 aa11.71□□□□□ -0.54
TRAF3-208ENST00000560371 MYPOPQ86VE0 399 aaPredicted RBP11.7□□□□□ -0.54
TRAF3-208ENST00000560371 OR4D10Q8NGI6 311 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 SFXN3Q9BWM7 321 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 MMP26Q9NRE1 261 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 GAPDHP04406 335 aaKnown RBP11.7□□□□□ -0.54
TRAF3-208ENST00000560371 DAOP14920 347 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 SPNP16150 400 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 FOXB2Q5VYV0 432 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 TEX261Q6UWH6 196 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 ITLN1Q8WWA0 313 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 SSMEM1Q8WWF3 244 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 NAT8BQ9UHF3 227 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 U3KQ87 197 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 HELZP42694 1942 aaKnown RBP11.7□□□□□ -0.54
TRAF3-208ENST00000560371 NDUFA2O43678 99 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 IFNL4K9M1U5 179 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 HTR1DP28221 377 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 TEX30Q5JUR7 227 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 PRSS54Q6PEW0 395 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 PERPQ96FX8 193 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 MARVELD1Q9BSK0 173 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 G6PCP35575 357 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 TRAPPC1Q9Y5R8 145 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 RPL36A-HNRNPH2H7BZ11 118 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 FGF8P55075 233 aaPredicted RBP11.7□□□□□ -0.54
TRAF3-208ENST00000560371 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
TRAF3-208ENST00000560371 MGST3O14880 152 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 CPN1P15169 458 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 PPP1CCP36873 323 aaKnown RBP11.69□□□□□ -0.54
TRAF3-208ENST00000560371 TMEM33P57088 247 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 OR4C5Q8NGB2 326 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 VWA8A3KMH1 1905 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 PRSS23O95084 383 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 NHLH1Q02575 133 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 NHLH2Q02577 135 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 C5orf52A6NGY3 159 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 GALR1P47211 349 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 OR4X1Q8NH49 305 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 CCL19Q99731 98 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 HAX1O00165 279 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 ICMTO60725 284 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 ALX3O95076 343 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 RIPPLY2Q5TAB7 128 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 PF4V1P10720 104 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 RBM11P57052 281 aaKnown RBP11.69□□□□□ -0.54
TRAF3-208ENST00000560371 LOXL3P58215 753 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
TRAF3-208ENST00000560371 CTDSPLO15194 276 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 NEURL1O76050 574 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms