RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CHCHD3Q9NX63 227 aaKnown RBP9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 TRAV39A0A0B4J263 110 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 LY6G6CO95867 125 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 IGLV1-51P01701 117 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 SLC2A2P11168 524 aaPredicted RBP9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 PRKACBP22694 351 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 TMEM244Q5VVB8 128 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 AHSA2Q719I0 299 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 ZFP41Q8N8Y5 198 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 CCDC54Q8NEL0 328 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 BPIFB6Q8NFQ5 453 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 OR10A7Q8NGE5 316 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 OR5D18Q8NGL1 313 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 OR13C5Q8NGS8 318 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 TMEM80Q96HE8 168 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 FAM110AQ9BQ89 295 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 ANKRD60Q9BZ19 345 aa9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 CNOT2Q9NZN8 540 aaKnown RBP9.82□□□□□ -0.84
RABGGTA-213ENST00000560127 ABCA13Q86UQ4 5058 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 TRAV24A0A0B4J272 114 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 EFCAB10A6NFE3 127 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 ATP6V0E1O15342 81 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 OGG1O15527 345 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 SLC25A17O43808 307 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 LGALS1P09382 135 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 RPS11P62280 158 aaKnown RBP eCLIP9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 IRF3Q14653 427 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 C6orf141Q5SZD1 244 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 RSBN1Q5VWQ0 802 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 ZNF529Q6P280 563 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 UTS2BQ765I0 119 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 OR52N1Q8NH53 320 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 PLPPR1Q8TBJ4 325 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 FGGYQ96C11 551 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 PGLYRP3Q96LB9 341 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 OPALINQ96PE5 141 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 SPACA5Q96QH8 159 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 HIPK2Q9H2X6 1198 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 VCXQ9H320 206 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 ZCCHC4Q9H5U6 513 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 RHOFQ9HBH0 211 aa9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 LSM2Q9Y333 95 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-213ENST00000560127 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 TMEM212A6NML5 194 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 CDK1P06493 297 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 VHLP40337 213 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 GBX2P52951 348 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 DMKNQ6E0U4 476 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 SATL1Q86VE3 508 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 MINDY2Q8NBR6 621 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 OR51A2Q8NGJ7 313 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 OR13C9Q8NGT0 318 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 CASTOR1Q8WTX7 329 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 SPSB1Q96BD6 273 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 ORAI1Q96D31 301 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 BARHL1Q9BZE3 327 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 PARP11Q9NR21 331 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 STUB1Q9UNE7 303 aa9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 RRP15Q9Y3B9 282 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-213ENST00000560127 IGHV7-81A0A0B4J1V7 117 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 SOX15O60248 233 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 PAX5Q02548 391 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 RPL22L1Q6P5R6 122 aaKnown RBP9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 ANKRD13BQ86YJ7 626 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 SAXO1Q8IYX7 474 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 OR5AK2Q8NH90 309 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 SMIM19Q96E16 107 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 NABP2Q9BQ15 211 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 THAP7Q9BT49 309 aaPredicted RBP9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 RSRP1Q9BUV0 290 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 DUSP21Q9H596 190 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
RABGGTA-213ENST00000560127 TRBV5-5A0A0J9YX44 114 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 SLC31A2O15432 143 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 MT-ND2P03891 347 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 MYL12AP19105 171 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 IL3RAP26951 378 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 BLVRBP30043 206 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 SOX2P48431 317 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 MRPL28Q13084 256 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 CCDC58Q4VC31 144 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 C19orf54Q5BKX5 351 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 RNLSQ5VYX0 342 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 LINC00322Q6ZN03 302 aaPredicted RBP9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 NANOGP1Q8N7R0 232 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 C8orf31Q8N9H6 132 aa9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 MRPL48Q96GC5 212 aaKnown RBP9.78□□□□□ -0.84
RABGGTA-213ENST00000560127 NR1H4Q96RI1 486 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms