RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 PDCD5O14737 125 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 CA11O75493 328 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 SLC2A2P11168 524 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 RAB3BP20337 219 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 PPP1CCP36873 323 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 TMEM50BP56557 158 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 HES1Q14469 280 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 CT45A1Q5HYN5 189 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 MOB3BQ86TA1 216 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 ZNF439Q8NDP4 499 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 CT45A3Q8NHU0 189 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 FCGR1BQ92637 280 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 ARHGAP5-AS1Q96IT6 56 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 RNF167Q9H6Y7 350 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 STUB1Q9UNE7 303 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 IFITM5A6NNB3 132 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 H3BUI4 141 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 OR2F2O95006 317 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 TSPAN15O95858 294 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 AMY1AP04745 511 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 AMY2AP04746 511 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 RAB7AP51149 207 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 HERPUD1Q15011 391 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 MOGAT2Q3SYC2 334 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 PLAC9Q5JTB6 97 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 Q8N2B8 174 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 PECRQ9BY49 303 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 LIN7BQ9HAP6 207 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 PKD1L1Q8TDX9 2849 aa11.84□□□□□ -0.51
RABGGTA-211ENST00000559850 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF736B4DX44 427 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 NAPSAO96009 420 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 LPLP06858 475 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 CLEC2LP0C7M8 214 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 CD28P10747 220 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 TMEM11P17152 192 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 GADD45AP24522 165 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 PSMD7P51665 324 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 HMGN3Q15651 99 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 KCTD21Q4G0X4 260 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 MORN2Q502X0 79 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 Q6ZTK2 550 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 IL1F10Q8WWZ1 152 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 ST6GALNAC6Q969X2 333 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 CHCHD6Q9BRQ6 235 aa11.83□□□□□ -0.52
RABGGTA-211ENST00000559850 A0A075B6Q4 140 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 LOC100506127A0A0U1RQW1 187 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 M0QZ24 198 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 GALP22466 123 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 IL3RAP26951 378 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 C16orf82Q7Z2V1 217 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 OR8H3Q8N146 312 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 C8orf31Q8N9H6 132 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 RTN4IP1Q8WWV3 396 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 PARP12Q9H0J9 701 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 RAB9BQ9NP90 201 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 RAB22AQ9UL26 194 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 TRRAPQ9Y4A5 3859 aa11.82□□□□□ -0.52
RABGGTA-211ENST00000559850 PEX14O75381 377 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 CD36P16671 472 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 FGF9P31371 208 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 MXD1Q05195 221 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 TMEM30BQ3MIR4 351 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 C11orf88Q6PI97 169 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 THNSL2Q86YJ6 484 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 OR56B1Q8NGI3 324 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 GALMQ96C23 342 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 AKR1E2Q96JD6 320 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 ABHD14AQ9BUJ0 271 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 ABRACLQ9P1F3 81 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 HSF4Q9ULV5 492 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 KCNK7Q9Y2U2 307 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 MOB4Q9Y3A3 225 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 CMYA5Q8N3K9 4069 aa11.81□□□□□ -0.52
RABGGTA-211ENST00000559850 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 FBXO24O75426 580 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms