RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ROS1P08922 2347 aa14.94□□□□□ -0.02
SNX1-208ENST00000559844 hCG_1807616A0A1W2PRN6 198 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 DEFB108AA8MXU0 73 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 HSD17B6O14756 317 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 DEDDO75618 318 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 PTBP3O95758 552 aaKnown RBP14.93□□□□□ -0.02
SNX1-208ENST00000559844 TPT1P13693 172 aaKnown RBP14.93□□□□□ -0.02
SNX1-208ENST00000559844 COX6B1P14854 86 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 LILRB1Q8NHL6 650 aaPredicted RBP14.93□□□□□ -0.02
SNX1-208ENST00000559844 MARVELD3Q96A59 401 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 SHARPINQ9H0F6 387 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 UFSP2Q9NUQ7 469 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 KCNIP1Q9NZI2 227 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 ATP6V1G2-DDX39BF2Z307 99 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 TAAR5O14804 337 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 WNT9BO14905 357 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 COL8A1P27658 744 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 TMEM268Q5VZI3 342 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 ZNF695Q8IW36 515 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 OR10V1Q8NGI7 309 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 IL1F10Q8WWZ1 152 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 SPIN2AQ99865 258 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 SPIN2BQ9BPZ2 258 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 PFDN2Q9UHV9 154 aa14.93□□□□□ -0.02
SNX1-208ENST00000559844 CD3EP07766 207 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 SELENOVP59797 346 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 ADAM5Q6NVV9 412 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 FAM90A1Q86YD7 464 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 SLC35G3Q8N808 338 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 BVESQ8NE79 360 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 LHFPL5Q8TAF8 219 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 LRRC29Q8WV35 223 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 PLEKHA2Q9HB19 425 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 PTPN13Q12923 2485 aa14.92□□□□□ -0.02
SNX1-208ENST00000559844 IGLV3-9A0A075B6K5 115 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 H0Y980 276 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 KCNAB3O43448 404 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 PSPNO60542 156 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 CDS2O95674 445 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 WNT2P09544 360 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 UCP1P25874 307 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 EIF5AP63241 154 aaKnown RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 FOXRED2Q8IWF2 684 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 IL22RA2Q969J5 263 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 AKR1E2Q96JD6 320 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 TAF9BQ9HBM6 251 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 LSM5Q9Y4Y9 91 aaKnown RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 MSGN1A6NI15 193 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 E5RGE8 158 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 K7EPK0 472 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 HSPA12AO43301 675 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 PGLYRP1O75594 196 aaPredicted RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 SCGB1D2O95969 90 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 HKR1P10072 659 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 CFHR2P36980 270 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 CEBPDP49716 269 aaPredicted RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 MSMPQ1L6U9 139 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 LRP11Q86VZ4 500 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 FAM71E2Q8N5Q1 922 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 OR5D13Q8NGL4 314 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 TMEM171Q8WVE6 324 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 SEBOXQ9HB31 216 aaPredicted RBP14.91□□□□□ -0.02
SNX1-208ENST00000559844 ZC4H2Q9NQZ6 224 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 NSG2Q9Y328 171 aa14.91□□□□□ -0.02
SNX1-208ENST00000559844 OOEPA6NGQ2 149 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 A6NNC1 897 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 MBPP02686 304 aaPredicted RBP14.9□□□□□ -0.02
SNX1-208ENST00000559844 AANATQ16613 207 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 BAP18Q8IXM2 172 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 SELENOHQ8IZQ5 122 aaKnown RBP14.9□□□□□ -0.02
SNX1-208ENST00000559844 LRRC20Q8TCA0 184 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 CYTL1Q9NRR1 136 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 OR1A1Q9P1Q5 309 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 RNF115Q9Y4L5 304 aa14.9□□□□□ -0.02
SNX1-208ENST00000559844 TRAV39A0A0B4J263 110 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 ZSCAN5BA6NJL1 495 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 LOXP28300 417 aaPredicted RBP14.89□□□□□ -0.03
SNX1-208ENST00000559844 RPL12P30050 165 aaKnown RBP14.89□□□□□ -0.03
SNX1-208ENST00000559844 PRR18Q8N4B5 295 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 CXorf58Q96LI9 332 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 CRYBG3Q68DQ2 2970 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 SRRM5B3KS81 715 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 ST8SIA3O43173 380 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 PLAUP00749 431 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 HEXAP06865 529 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 F2RP25116 425 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 COL10A1Q03692 680 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 VHLLQ6RSH7 139 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 NUP37Q8NFH4 326 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 RBPMSQ93062 196 aaKnown RBP14.89□□□□□ -0.03
SNX1-208ENST00000559844 MEGF10Q96KG7 1140 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 DNTTIP1Q9H147 329 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 SESN1Q9Y6P5 492 aa14.89□□□□□ -0.03
SNX1-208ENST00000559844 HRNRQ86YZ3 2850 aaPredicted RBP14.88□□□□□ -0.03
SNX1-208ENST00000559844 SHISA9B4DS77 424 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 OR3A1P47881 315 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 PAX5Q02548 391 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 TESK1Q15569 626 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 TOR2AQ5JU69 321 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms