RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LDLRAD2Q5SZI1 272 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 STEAP3Q658P3 488 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 C17orf50Q8WW18 174 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 CABLES2Q9BTV7 478 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 PRDM13Q9H4Q3 707 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 PSG11Q9UQ72 335 aa17.6■□□□□ 0.41
SNX1-206ENST00000559389 A6NHS1 94 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 J3QR06 171 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 FABP7O15540 132 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 IGHV3-7P01780 117 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 HLA-DQB1P01920 261 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 LGALS4P56470 323 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 HERPUD1Q15011 391 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 MINOS1Q5TGZ0 78 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 LHFPL4Q7Z7J7 247 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 SIGLECL1Q8N7X8 197 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 C8orf31Q8N9H6 132 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 ZNF439Q8NDP4 499 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 OR52L2PQ8NGH6 319 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 OR10V1Q8NGI7 309 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 OR4A4PQ8NGN8 299 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 IL1F10Q8WWZ1 152 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 GCDHQ92947 438 aaPredicted RBP17.59■□□□□ 0.41
SNX1-206ENST00000559389 OCEL1Q9H607 264 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 OR2S2Q9NQN1 319 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 ZNRD1Q9P1U0 126 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 MINOS1-NBL1R4GNA1 71 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 A3GALT2U3KPV4 340 aa17.59■□□□□ 0.41
SNX1-206ENST00000559389 IGKV1D-8A0A087WSZ0 117 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 IGKV1-6A0A0C4DH72 117 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 TOR1AO14656 332 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 FBP1P09467 338 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 PRRX1P54821 245 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 CNIH2Q6PI25 160 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 LDLRAD3Q86YD5 345 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 MMP28Q9H239 520 aa17.58■□□□□ 0.4
SNX1-206ENST00000559389 YPEL1O60688 119 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 TPPPO94811 219 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 DIRAS3O95661 229 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 HTR1DP28221 377 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 PPP1CCP36873 323 aaKnown RBP17.57■□□□□ 0.4
SNX1-206ENST00000559389 MADCAM1Q13477 382 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 MORN2Q502X0 79 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 LY6G6FQ5SQ64 297 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 LINC00311Q8N616 119 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 ZNF418Q8TF45 676 aaPredicted RBP17.57■□□□□ 0.4
SNX1-206ENST00000559389 YPEL2Q96QA6 119 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 OCSTAMPQ9BR26 566 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 OR1A1Q9P1Q5 309 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 MRPS7Q9Y2R9 242 aaKnown RBP17.57■□□□□ 0.4
SNX1-206ENST00000559389 FAM96BQ9Y3D0 163 aa17.57■□□□□ 0.4
SNX1-206ENST00000559389 AMMECR1Q9Y4X0 333 aaPredicted RBP17.57■□□□□ 0.4
SNX1-206ENST00000559389 BUB1B-PAK6H3BSN5 160 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 SLC31A2O15432 143 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 GSTT2P0CG29 244 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 GSTT2BP0CG30 244 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 PRSS3P35030 304 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 CBX5P45973 191 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 HILS1P60008 231 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 SLC25A48Q6ZT89 311 aaKnown RBP17.56■□□□□ 0.4
SNX1-206ENST00000559389 HOGA1Q86XE5 327 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 SNX29P2Q8IUI4 249 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 ST6GALNAC5Q9BVH7 336 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 MMP27Q9H306 513 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 SLC23A1Q9UHI7 598 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 ANAPC10Q9UM13 185 aa17.56■□□□□ 0.4
SNX1-206ENST00000559389 A0A1W2PPE3 182 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 RGS11O94810 467 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 IFNA2P01563 188 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 LPLP06858 475 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 IGSF11Q5DX21 431 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 RBMS3Q6XE24 437 aaKnown RBP17.55■□□□□ 0.4
SNX1-206ENST00000559389 Q6YL49 198 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 DYNAPQ8N1N2 210 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 GVQW1Q8N7I0 195 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 CREB3L1Q96BA8 519 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 MALSU1Q96EH3 234 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 SCPEP1Q9HB40 452 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 DPM3Q9P2X0 92 aa17.55■□□□□ 0.4
SNX1-206ENST00000559389 A0A0A6YYJ9 748 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 LY6LH3BQJ8 138 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 TCF21O43680 179 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 ZBTB25P24278 435 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 CT45A1Q5HYN5 189 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 PRIMA1Q86XR5 153 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 BEST4Q8NFU0 473 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 CT45A3Q8NHU0 189 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 GPX8Q8TED1 209 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 ZDHHC16Q969W1 377 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 DIRAS2Q96HU8 199 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 ABHD14AQ9BUJ0 271 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 PARP12Q9H0J9 701 aaKnown RBP17.54■□□□□ 0.4
SNX1-206ENST00000559389 MEGF9Q9H1U4 602 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 BATF3Q9NR55 127 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 ANXA10Q9UJ72 324 aa17.54■□□□□ 0.4
SNX1-206ENST00000559389 TRBV6-7A0A0A0MS04 114 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 MEIS3P1A6NDR6 274 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 LEUTXA8MZ59 168 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 HSPA12AO43301 675 aa17.53■□□□□ 0.4
SNX1-206ENST00000559389 PAX6P26367 422 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms