RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
SPG11-216ENST00000559347 OR2W3Q7Z3T1 314 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 C6orf201Q7Z4U5 140 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 IZUMO1Q8IYV9 350 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 OR10V1Q8NGI7 309 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 ST6GALNAC6Q969X2 333 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 NEDD4LQ96PU5 975 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 LPAR5Q9H1C0 372 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 PLGRKTQ9HBL7 147 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 TAF9BQ9HBM6 251 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 GNG12Q9UBI6 72 aa8.72□□□□□ -1.01
SPG11-216ENST00000559347 AK6Q9Y3D8 172 aaKnown RBP8.72□□□□□ -1.01
SPG11-216ENST00000559347 FOXI3A8MTJ6 420 aaPredicted RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 M0QZK8 103 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 CCRL2O00421 344 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 DENRO43583 198 aaKnown RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 MRPS14O60783 128 aaKnown RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 IGKV1D-33P01593 117 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 IGKV1-33P01594 117 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 GAPDHP04406 335 aaKnown RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 LPLP06858 475 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 ARSBP15848 533 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 TMEM11P17152 192 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 HES1Q14469 280 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 GNMTQ14749 295 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 HMGN3Q15651 99 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 RAB11BQ15907 218 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 UBE2UQ5VVX9 321 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 CD200R1LQ6Q8B3 271 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 FAM110DQ8TAY7 271 aaPredicted RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
SPG11-216ENST00000559347 Q9H521 79 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 JPT1Q9UK76 154 aa8.71□□□□□ -1.02
SPG11-216ENST00000559347 SHISA3A0PJX4 238 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 FGF16O43320 207 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 TXNL1O43396 289 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 WIPF1O43516 503 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 NAPSAO96009 420 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 BLVRBP30043 206 aaPredicted RBP8.7□□□□□ -1.02
SPG11-216ENST00000559347 ZNF134P52741 427 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 CLDN12P56749 244 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 EBI3Q14213 229 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 CT45A1Q5HYN5 189 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 C5orf24Q7Z6I8 188 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 MOB3BQ86TA1 216 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 LYG1Q8N1E2 194 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 FAM89BQ8N5H3 189 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 Q8N6K4 173 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 OR51D1Q8NGF3 324 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 CT45A3Q8NHU0 189 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
SPG11-216ENST00000559347 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
SPG11-216ENST00000559347 FAAP24Q9BTP7 215 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 OR2S2Q9NQN1 319 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 KCNIP1Q9NZI2 227 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 V9GY05 133 aa8.7□□□□□ -1.02
SPG11-216ENST00000559347 IGHV3-72A0A0B4J1Y9 119 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 TRAV1-2A0A0B4J238 106 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 TRDV1A0A1B0GX56 115 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 LDLRAD4O15165 306 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 SOCS1O15524 211 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 PPP1CCP36873 323 aaKnown RBP8.69□□□□□ -1.02
SPG11-216ENST00000559347 OR10A3P58181 314 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 HTD2P86397 168 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 NSUN5P1Q3KNT7 163 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 MORN2Q502X0 79 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 C9orf152Q5JTZ5 239 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 HES5Q5TA89 166 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 ZNF880Q6PDB4 577 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 MOB1BQ7L9L4 216 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 TGIF2LXQ8IUE1 241 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 SPARTQ8N0X7 666 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 OR52L2PQ8NGH6 319 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 FAM3DQ96BQ1 224 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 EAF1Q96JC9 268 aaPredicted RBP8.69□□□□□ -1.02
SPG11-216ENST00000559347 ABHD14AQ9BUJ0 271 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 PLEKHJ1Q9NW61 149 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 STEAP1Q9UHE8 339 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 HSF4Q9ULV5 492 aa8.69□□□□□ -1.02
SPG11-216ENST00000559347 TRBV6-6A0A0A6YYG2 114 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 TMEM272A0A1B0GTI8 110 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 KCNAB3O43448 404 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 YPEL1O60688 119 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 OPN1MWP04001 364 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 OPN1MW2P0DN77 364 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 OPN1MW3P0DN78 364 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 GALP22466 123 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 MYL9P24844 172 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 PSMB9P28065 219 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 CD1BP29016 333 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 VEGFCP49767 419 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 PSMD7P51665 324 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 HLA-DRB3P79483 266 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 CD83Q01151 205 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 PLA2G7Q13093 441 aa8.68□□□□□ -1.02
SPG11-216ENST00000559347 HNF4GQ14541 408 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms