RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 RPRMQ9NS64 109 aa14.07□□□□□ -0.16
SPG11-215ENST00000559193 PLA2G3Q9NZ20 509 aa14.07□□□□□ -0.16
SPG11-215ENST00000559193 GNG13Q9P2W3 67 aa14.07□□□□□ -0.16
SPG11-215ENST00000559193 PRSS50Q9UI38 385 aa14.07□□□□□ -0.16
SPG11-215ENST00000559193 IFITM10A6NMD0 228 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.06□□□□□ -0.16
SPG11-215ENST00000559193 HOXA5P20719 270 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 ZNF726P1Q15940 193 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 OR10G4Q8NGN3 311 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 LSM10Q969L4 123 aaKnown RBP14.06□□□□□ -0.16
SPG11-215ENST00000559193 R4GN57 208 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 TGIF2-C20orf24A0A0A6YYL0 155 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 SYNGR2O43760 224 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 APLNRP35414 380 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 GLIPR1P48060 266 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 ZNF674Q2M3X9 581 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 SPATA46Q5T0L3 261 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 FAM90A2PQ658T7 463 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 ZNF525Q8N782 197 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 ZNF665Q9H7R5 613 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 SIRT7Q9NRC8 400 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 PPP1R3CQ9UQK1 317 aa14.06□□□□□ -0.16
SPG11-215ENST00000559193 PIGBOS1A0A0B4J2F0 54 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 A0A1W2PR80 420 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 CXorf65A6NEN9 183 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 C9orf172C9J069 976 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 J3QT63 122 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 METTL15P1P0C7V9 234 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 PRR18Q8N4B5 295 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 UBALD1Q8TB05 177 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 IL18BPO95998 194 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 ZNF585BQ52M93 769 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 ZPBPQ9BS86 351 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 PSENENQ9NZ42 101 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 FOXJ2Q9P0K8 574 aa14.05□□□□□ -0.16
SPG11-215ENST00000559193 LRP5LA4QPB2 252 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 SIRPB1O00241 398 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 MT-CO3P00414 261 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 BCL2P10415 239 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 CLN3Q13286 438 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 LPAL2Q16609 132 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 ZNF787Q6DD87 383 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 LINC00696Q6ZRV3 163 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 WDR86Q86TI4 376 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 ZNF610Q8N9Z0 462 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 SCGB1C1Q8TD33 95 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 EDARADDQ8WWZ3 215 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 CISD1Q9NZ45 108 aaKnown RBP14.04□□□□□ -0.16
SPG11-215ENST00000559193 DOK5Q9P104 306 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 ZFP92A6NM28 416 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 S100PP25815 95 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 CD200P41217 278 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 RAB11AP62491 216 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 LCN15Q6UWW0 184 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 ZNF497Q6ZNH5 498 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 MOB1BQ7L9L4 216 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 TOLLIPQ9H0E2 274 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 C12orf49Q9H741 205 aa14.04□□□□□ -0.16
SPG11-215ENST00000559193 ZMAT5Q9UDW3 170 aaKnown RBP14.04□□□□□ -0.16
SPG11-215ENST00000559193 JMJD7P0C870 316 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 CDX1P47902 265 aaPredicted RBP14.03□□□□□ -0.16
SPG11-215ENST00000559193 NDUFA6P56556 154 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 PLGLB1Q02325 96 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 MDP1Q86V88 176 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 MCEMP1Q8IX19 187 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 OR1K1Q8NGR3 316 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 PSMG3Q9BT73 122 aaPredicted RBP14.03□□□□□ -0.16
SPG11-215ENST00000559193 DDA1Q9BW61 102 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 GP6Q9HCN6 339 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 KCNS2Q9ULS6 477 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 OR2H2O95918 312 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 IGHV2-70P01814 119 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 MDH2P40926 338 aaKnown RBP14.03□□□□□ -0.16
SPG11-215ENST00000559193 FGF8P55075 233 aaPredicted RBP14.03□□□□□ -0.16
SPG11-215ENST00000559193 RCC1LQ96I51 464 aaKnown RBP14.03□□□□□ -0.16
SPG11-215ENST00000559193 GGACTQ9BVM4 153 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 BCL2L14Q9BZR8 327 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 STRADBQ9C0K7 418 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
SPG11-215ENST00000559193 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.16
SPG11-215ENST00000559193 ZNF16P17020 682 aaPredicted RBP14.02□□□□□ -0.16
SPG11-215ENST00000559193 LRRC75BQ2VPJ9 315 aa14.02□□□□□ -0.16
SPG11-215ENST00000559193 LIN7CQ9NUP9 197 aaKnown RBP14.02□□□□□ -0.16
SPG11-215ENST00000559193 TREM2Q9NZC2 230 aa14.02□□□□□ -0.16
SPG11-215ENST00000559193 TRAPPC2LQ9UL33 140 aa14.02□□□□□ -0.16
SPG11-215ENST00000559193 ESPL1Q14674 2120 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 TRAV20A0A0B4J274 112 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 A0A1W2PNU3 283 aaPredicted RBP14.02□□□□□ -0.17
SPG11-215ENST00000559193 CYB5BO43169 146 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BKO60814 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BJP06899 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BOP23527 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BBP33778 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BDP58876 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BCP62807 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST2H2BEQ16778 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.02□□□□□ -0.17
SPG11-215ENST00000559193 SPNS3Q6ZMD2 512 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms