RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 RITA1Q96K30 269 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 Q9H521 79 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 PLGRKTQ9HBL7 147 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 SPACA1Q9HBV2 294 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 ABCB10Q9NRK6 738 aa10.08□□□□□ -0.8
RABGGTA-207ENST00000558936 PLXNB1O43157 2135 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 TRBV6-6A0A0A6YYG2 114 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 LEUTXA8MZ59 168 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 SDCBPO00560 298 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 MFNGO00587 321 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 TOR1AO14656 332 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 TIMM23O14925 209 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 SCTP09683 121 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 CD36P16671 472 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 RAB3BP20337 219 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 REG1BP48304 166 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 PRRX1P54821 245 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 RBM39Q14498 530 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 DRAM1Q8N682 238 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 Q8N6K4 173 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 C8orf31Q8N9H6 132 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 FCGR1BQ92637 280 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 CHCHD6Q9BRQ6 235 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 WNT10AQ9GZT5 417 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 RANBP3Q9H6Z4 567 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 LIN7BQ9HAP6 207 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 PLSCR3Q9NRY6 295 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 TRAPPC2LQ9UL33 140 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 HSF4Q9ULV5 492 aa10.07□□□□□ -0.8
RABGGTA-207ENST00000558936 IGHV3-72A0A0B4J1Y9 119 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 CA11O75493 328 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 CD3GP09693 182 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 PPP1CCP36873 323 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 ZNF137PP52743 207 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 LINC00205P59089 165 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 ZNF816Q0VGE8 651 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 EBI3Q14213 229 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 TCTEX1D4Q5JR98 221 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 SLC16A12Q6ZSM3 486 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 TSPAN14Q8NG11 270 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 OR56B4Q8NH76 319 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 SLC25A38Q96DW6 304 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 C5orf30Q96GV9 206 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 AGMATQ9BSE5 352 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 Q9N2K0 584 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 PITPNC1Q9UKF7 332 aa10.06□□□□□ -0.8
RABGGTA-207ENST00000558936 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 GNB3P16520 340 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 CEACAM3P40198 252 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 RTN4IP1Q8WWV3 396 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 CREB3L1Q96BA8 519 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 RBM14Q96PK6 669 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 NAA50Q9GZZ1 169 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 ZNF230Q9UIE0 474 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 RAB22AQ9UL26 194 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
RABGGTA-207ENST00000558936 NOTOA8MTQ0 251 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 OOSP1A8MZH6 123 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 BRS3P32247 399 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 RPS19P39019 145 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 OR3A3P47888 321 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 HTD2P86397 168 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 MXD1Q05195 221 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 SFXN4Q6P4A7 337 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 Q6ZTK2 550 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 C11orf44Q8N8P7 122 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 OR2T6Q8NHC8 308 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 OR2S2Q9NQN1 319 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 PLEKHJ1Q9NW61 149 aa10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-207ENST00000558936 LOC100506127A0A0U1RQW1 187 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 HSD17B6O14756 317 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 SSX5O60225 188 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 YPEL1O60688 119 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 OR2F2O95006 317 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 TSPAN15O95858 294 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 RAB6AP20340 208 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 F2RL1P55085 397 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 MADCAM1Q13477 382 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 Q3ZCU0 254 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 C11orf88Q6PI97 169 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 ZNF554Q86TJ5 538 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
RABGGTA-207ENST00000558936 KLHDC1Q8N7A1 406 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms