RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ZSWIM8A7E2V4 1837 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 KMT2EQ8IZD2 1858 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TRBV24-1A0A075B6N3 115 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 IGSF23A1L1A6 192 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 GOLGA6L4A6NEF3 574 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 B4DEV8 164 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 GGTLC3B5MD39 225 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CCRL2O00421 344 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 LIN7AO14910 233 aaPredicted RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 BIRC5O15392 142 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 HPGDSO60760 199 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 GYPCP04921 128 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 FBP1P09467 338 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PSKH1P11801 424 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CTSEP14091 401 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CXCL2P19875 107 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CXCL3P19876 107 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PSMA1P25786 263 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 AGTR1P30556 359 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 IFNGR2P38484 337 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PSMB3P49720 205 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CDK9P50750 372 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 BLVRAP53004 296 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 FLI1Q01543 452 aaPredicted RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 PAFAH1B3Q15102 231 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 MMDQ15546 238 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 OR8G1Q15617 311 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 LRRC26Q2I0M4 334 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 ZCWPW2Q504Y3 356 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PYDC2Q56P42 97 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 C10orf91Q5T1B1 145 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 AMMECR1LQ6DCA0 310 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 NOXRED1Q6NXP6 359 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 FAM151BQ6UXP7 276 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 ATP5L2Q7Z4Y8 100 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 SLC13A5Q86YT5 568 aaPredicted RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 HS3ST5Q8IZT8 346 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TMEM251Q8N6I4 163 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PACRGLQ8N7B6 248 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 Q8NAQ8 132 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 LMX1AQ8TE12 382 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 SLC37A2Q8TED4 501 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TNFAIP8L1Q8WVP5 186 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TAMM41Q96BW9 452 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 SMIM12Q96EX1 92 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PYURFQ96I23 114 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TRIB3Q96RU7 358 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CDCA4Q9BXL8 241 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 UGT2B28Q9BY64 529 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 PARD6GQ9BYG4 376 aaPredicted RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 MROQ9BYG7 248 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 DRC3Q9H069 523 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 GTSF1LQ9H1H1 148 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 DUSP21Q9H596 190 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 C11orf49Q9H6J7 331 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 FAM206AQ9NX38 181 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TAS2R1Q9NYW7 299 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TMEM216Q9P0N5 145 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 RPUSD1Q9UJJ7 312 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 PSMD13Q9UNM6 376 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 TP53TG1Q9Y2A0 90 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 CARHSP1Q9Y2V2 147 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 NOSIPQ9Y314 301 aaKnown RBP0.82□□□□□ -2.28
USP3-209ENST00000558925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.82□□□□□ -2.28
USP3-209ENST00000558925 NID2Q14112 1375 aa0.82□□□□□ -2.28
USP3-209ENST00000558925 OTOFQ9HC10 1997 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 SHANK3Q9BYB0 1731 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 NUP153P49790 1475 aaKnown RBP0.81□□□□□ -2.28
USP3-209ENST00000558925 ARAP3Q8WWN8 1544 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 MYO5BQ9ULV0 1848 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 A0A1B0GU33 70 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 M0QYV0 167 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 SLC31A1O15431 190 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 NIPSNAP2O75323 286 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 SOX14O95416 240 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 PSMG1O95456 288 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 TYMSP04818 313 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 REG1AP05451 166 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 ATP5G1P05496 136 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 CRYGDP07320 174 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 GUSBP08236 651 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 P0C880 135 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 OR13C7P0DN81 318 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 OR12D1P0DN82 309 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 CD99P14209 185 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 HIST1H1CP16403 213 aaKnown RBP0.81□□□□□ -2.28
USP3-209ENST00000558925 HSPA9P38646 679 aaKnown RBP0.81□□□□□ -2.28
USP3-209ENST00000558925 DAPP51397 102 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 HPCAP84074 193 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 TMEM267Q0VDI3 215 aaPredicted RBP0.81□□□□□ -2.28
USP3-209ENST00000558925 MLLT11Q13015 90 aaPredicted RBP0.81□□□□□ -2.28
USP3-209ENST00000558925 IHHQ14623 411 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 MAPK14Q16539 360 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 FAM229BQ4G0N7 80 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 SPIN3Q5JUX0 258 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 DNM1P34Q6PK57 102 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 BRD3OSQ6XYD6 125 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 Q6ZQT7 251 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 Q6ZRU5 148 aa0.81□□□□□ -2.28
USP3-209ENST00000558925 ZBTB8OSQ8IWT0 167 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms