RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 KCNIP3Q9Y2W7 256 aa10.8□□□□□ -0.68
SMAD3-207ENST00000558763 CENPEQ02224 2701 aa10.8□□□□□ -0.68
SMAD3-207ENST00000558763 C3orf85A0A1B0GTC6 90 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 E7EQL1 145 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 CD80P33681 288 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 EXOSC2Q13868 293 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 ZCCHC24Q8N2G6 241 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 BVESQ8NE79 360 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 OR13A1Q8NGR1 328 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 RRNAD1Q96FB5 475 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TOLLIPQ9H0E2 274 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 ARL6Q9H0F7 186 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TMEM222Q9H0R3 208 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 METTL8Q9H825 291 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 MAB21L2Q9Y586 359 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TACC2O95359 2948 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 A6NNC1 897 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 C15orf65H3BRN8 121 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 HSD17B6O14756 317 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 PHF1O43189 567 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 KCNAB3O43448 404 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 WNT2P09544 360 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 COL8A1P27658 744 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 HTR2BP41595 481 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 GABRA2P47869 451 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 RAB32Q13637 225 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 NDUFA5Q16718 116 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 KRBOX4Q5JUW0 171 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 STUMQ69YW2 141 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 KCNRGQ8N5I3 272 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 BOLLQ8N9W6 283 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 OR10V1Q8NGI7 309 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 LILRB1Q8NHL6 650 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TMEM56Q96MV1 263 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 SPOCK3Q9BQ16 436 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TMEM204Q9BSN7 226 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 CISD1Q9NZ45 108 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 OR5AC2Q9NZP5 309 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 RNF7Q9UBF6 113 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 TMEM56-RWDD3S4R434 201 aa10.79□□□□□ -0.68
SMAD3-207ENST00000558763 FASNP49327 2511 aaKnown RBP10.79□□□□□ -0.68
SMAD3-207ENST00000558763 DOPEY2Q9Y3R5 2298 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 A0A1B0GW55 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 RPS10-NUDT3A0A1W2PQS6 291 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 OOEPA6NGQ2 149 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 CYB5R3P00387 301 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-207ENST00000558763 HBZP02008 142 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L2P0CJ85 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L3P0CJ86 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L4P0CJ87 422 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L5P0CJ88 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L6P0CJ89 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L7P0CJ90 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 SELLP14151 372 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 UCP1P25874 307 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 SSTR5P35346 364 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 IAH1Q2TAA2 248 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-207ENST00000558763 ZNF672Q499Z4 452 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-207ENST00000558763 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4L9Q6RFH8 374 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-207ENST00000558763 ZNF565Q8N9K5 539 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 MRGPRDQ8TDS7 321 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 ERGIC1Q969X5 290 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DNAJB11Q9UBS4 358 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 DUX4Q9UBX2 424 aa10.78□□□□□ -0.68
SMAD3-207ENST00000558763 CELSR2Q9HCU4 2923 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 A0A1W2PPR1 153 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 K7N7A8 449 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 PGLYRP1O75594 196 aaPredicted RBP10.77□□□□□ -0.68
SMAD3-207ENST00000558763 OR2F2O95006 317 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 COX6B1P14854 86 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 CCL8P80075 99 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 OR2F1Q13607 317 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 GNMTQ14749 295 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 MST1LQ2TV78 715 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 CR1LQ2VPA4 569 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 PRSS54Q6PEW0 395 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 LGI3Q8N145 548 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 SLC35G3Q8N808 338 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 ZNRF1Q8ND25 227 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 THAP6Q8TBB0 222 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 C5orf30Q96GV9 206 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 SNX22Q96L94 193 aa10.77□□□□□ -0.68
SMAD3-207ENST00000558763 MSGN1A6NI15 193 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 CDS2O95674 445 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 AP2S1P53680 142 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-207ENST00000558763 TEX36Q5VZQ5 186 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 ACOT7LQ6ZUV0 252 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 SDSLQ96GA7 329 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 LURAP1Q96LR2 239 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 VRK1Q99986 396 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-207ENST00000558763 ITGB1BP2Q9UKP3 347 aa10.77□□□□□ -0.69
SMAD3-207ENST00000558763 A0A0D9SG52 128 aa10.76□□□□□ -0.69
SMAD3-207ENST00000558763 ODAMA1E959 279 aa10.76□□□□□ -0.69
SMAD3-207ENST00000558763 MEX3AA1L020 520 aaKnown RBP10.76□□□□□ -0.69
SMAD3-207ENST00000558763 H0Y980 276 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms