RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ZNF134P52741 427 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 TPPP2P59282 170 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 RAB40BQ12829 278 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 PLGLAQ15195 96 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 STEAP3Q658P3 488 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 ZNF660Q6AZW8 331 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 PARP16Q8N5Y8 322 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 ZNF439Q8NDP4 499 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 TSEN15Q8WW01 171 aaKnown RBP13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 FAM110AQ9BQ89 295 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 METTL9Q9H1A3 318 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 RETNQ9HD89 108 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 ING4Q9UNL4 249 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 OR4C45A6NMZ5 311 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 SOX15O60248 233 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 ZP3P21754 424 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 RBM11P57052 281 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 FLOT2Q14254 428 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 C6orf183Q5T699 404 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 LINC00596Q86U02 117 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 OR8J1Q8NGP2 316 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 OR52N1Q8NH53 320 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 MRPL48Q96GC5 212 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 MS4A10Q96PG2 267 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 ZNF581Q9P0T4 197 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 CEPT1Q9Y6K0 416 aa13.64□□□□□ -0.23
TSPAN3-204ENST00000558394 ALMS1Q8TCU4 4167 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 G3V2T6 193 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 GEMIN2O14893 280 aaKnown RBP13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 CDRT1O95170 752 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 MT-ND4P03905 459 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 LRRC36Q1X8D7 754 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 MPV17LQ2QL34 196 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 ACTBL2Q562R1 376 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 ZNF497Q6ZNH5 498 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 RITA1Q96K30 269 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 RIBC2Q9H4K1 309 aa13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 PAK1IP1Q9NWT1 392 aaPredicted RBP13.63□□□□□ -0.23
TSPAN3-204ENST00000558394 RGS11O94810 467 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 SERPINA2P20848 420 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 CRIP2P52943 208 aaPredicted RBP13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 NHLRC3Q5JS37 347 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 SYT6Q5T7P8 510 aaPredicted RBP13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 UNQ5815/PRO19632Q6UWF5 114 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 NPBQ8NG41 125 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 PELI1Q96FA3 418 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 RHOVQ96L33 236 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 MRPL20Q9BYC9 149 aaKnown RBP13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 HIPK2Q9H2X6 1198 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 SLA2Q9H6Q3 261 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 OR2S2Q9NQN1 319 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 FBXO7Q9Y3I1 522 aa13.62□□□□□ -0.23
TSPAN3-204ENST00000558394 SHISA3A0PJX4 238 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 NDUFA3O95167 84 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 HBZP02008 142 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 CX3CL1P78423 397 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 NDPQ00604 133 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 C19orf54Q5BKX5 351 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 KDM4DQ6B0I6 523 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 TRAT1Q6PIZ9 186 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 ASCL4Q6XD76 172 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 PPP1R27Q86WC6 154 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 ZDHHC13Q8IUH4 622 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 OR4K15Q8NH41 348 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 OR5AK2Q8NH90 309 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
TSPAN3-204ENST00000558394 C13orf42A0A1B0GVH6 325 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 TCRBV3S1A0A5B6 114 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 TMEM212A6NML5 194 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 MCRIP1C9JLW8 97 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 TRGV3P03979 118 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 CD200R1LQ6Q8B3 271 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 OR51A2Q8NGJ7 313 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 OR9G4Q8NGQ1 327 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 OR1L1Q8NH94 360 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 SPACA1Q9HBV2 294 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 ZNF355PQ9NSJ1 428 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 ETAA1Q9NY74 926 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 CNOT2Q9NZN8 540 aaKnown RBP13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 NUBP2Q9Y5Y2 271 aa13.6□□□□□ -0.23
TSPAN3-204ENST00000558394 ZNF780AO75290 641 aaPredicted RBP13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 TATDN3Q17R31 274 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 MORN2Q502X0 79 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 Q8N402 240 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 MRPS24Q96EL2 167 aaKnown RBP13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 IMPAD1Q9NX62 359 aa13.59□□□□□ -0.23
TSPAN3-204ENST00000558394 KCNIP1Q9NZI2 227 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms