RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ATP1A1-AS1Q5TC04 95 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 MVB12AQ96EY5 273 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 LMX1BO60663 402 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 PLAUP00749 431 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 GCGP01275 180 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 ADRA2AP08913 450 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 KIR2DL1P43626 348 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 IFITM3Q01628 133 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 FXYD3Q14802 87 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 PTP4A1Q93096 173 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 TCFL5Q9UL49 500 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 KIAA1644Q3SXP7 199 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 KRTCAP3Q53RY4 240 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 SLC25A30Q5SVS4 291 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 TMEM136Q6ZRR5 245 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 OR4D11Q8NGI4 311 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 ZNF418Q8TF45 676 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 SSC5DA1L4H1 1573 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 N4BP2Q86UW6 1770 aaPredicted RBP12.2□□□□□ -0.46
SPG11-210ENST00000558319 KBTBD11O94819 623 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 COX19Q49B96 90 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 GCSAMLQ5JQS6 135 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 IL36RNQ9UBH0 155 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 OR2W1Q9Y3N9 320 aa12.2□□□□□ -0.46
SPG11-210ENST00000558319 TMEM238LA0A1B0GVL6 79 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 A6NJY4 79 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 SUMO3P55854 103 aaPredicted RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 EIF3IQ13347 325 aaKnown RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 OR5R1Q8NH85 324 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 PERPQ96FX8 193 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 CTAG1AP78358 180 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 SLC52A3Q9NQ40 469 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 GRIFINA4D1Z8 144 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 VSIG10L2P0DP72 767 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 EPHA8P29322 1005 aaPredicted RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 RAB1CQ92928 201 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 ADTRPQ96IZ2 230 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 PARLQ9H300 379 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 IGHV5-10-1A0A0J9YXX1 117 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 LILRA5A6NI73 299 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 SCAND1P57086 179 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 IL11RAQ14626 422 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 KIAA0040Q15053 153 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 PLPPR5Q32ZL2 321 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 ASB10Q8WXI3 467 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 DMRTA2Q96SC8 542 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 NEU1Q99519 415 aa12.19□□□□□ -0.46
SPG11-210ENST00000558319 AMMECR1Q9Y4X0 333 aaPredicted RBP12.19□□□□□ -0.46
SPG11-210ENST00000558319 CTXND1A0A1B0GTU2 59 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 C7orf71A4D174 169 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 OGG1O15527 345 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 NPBWR2P48146 333 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 MESTQ5EB52 335 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 EID2BQ96D98 161 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 GPHA2Q96T91 129 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 THYN1Q9P016 225 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
SPG11-210ENST00000558319 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 PITX3O75364 302 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 COX6CP09669 75 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 LOXL3P58215 753 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 NUP37Q8NFH4 326 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 GUCD1Q96NT3 240 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 COL25A1Q9BXS0 654 aaPredicted RBP12.18□□□□□ -0.46
SPG11-210ENST00000558319 H0YL77 283 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 FFAR1O14842 300 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 ZIC3O60481 467 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 TGIF1Q15583 401 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 MRGPRX3Q96LB0 322 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 AMMECR1LQ6DCA0 310 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 HMGCLL1Q8TB92 370 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 LEAP2Q969E1 77 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 OR8G5Q8NG78 346 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 LINC00615Q96LM1 132 aaPredicted RBP12.18□□□□□ -0.46
SPG11-210ENST00000558319 TMEM38BQ9NVV0 291 aa12.18□□□□□ -0.46
SPG11-210ENST00000558319 IGHV3-23P01764 117 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 BCL2P10415 239 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 COL10A1Q03692 680 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 TEPPQ6URK8 271 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 OR4B1Q8NGF8 309 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 APOBEC4Q8WW27 367 aaKnown RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 FOXC2Q99958 501 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 KLK15Q9H2R5 256 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 KCNE1BA0A087WTH5 132 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 NKX2-2O95096 273 aa12.17□□□□□ -0.46
SPG11-210ENST00000558319 PRB4P10163 310 aaPredicted RBP12.17□□□□□ -0.46
SPG11-210ENST00000558319 OR10S1Q8NGN2 331 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms