RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GNG10P50151 68 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 PSMD7P51665 324 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 HTD2P86397 168 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 GABPB1Q06547 395 aaPredicted RBP8.03□□□□□ -1.12
USP3-207ENST00000558218 MED22Q15528 200 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 LTC4SQ16873 150 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 SIGIRRQ6IA17 410 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
USP3-207ENST00000558218 CEACAM19Q7Z692 300 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 LRRTM1Q86UE6 522 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 IZUMO1Q8IYV9 350 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 C5orf56Q8N8D9 126 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 TMEM104Q8NE00 496 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 OR2T10Q8NGZ9 312 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 CHPT1Q8WUD6 406 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 CCDC107Q8WV48 283 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 LEAP2Q969E1 77 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 GON7Q9BXV9 100 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 ANKRD60Q9BZ19 345 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 RIMS4Q9H426 269 aaPredicted RBP8.03□□□□□ -1.12
USP3-207ENST00000558218 BANF2Q9H503 90 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 ZFP57Q9NU63 452 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 ZNF581Q9P0T4 197 aa8.03□□□□□ -1.12
USP3-207ENST00000558218 NOTCH3Q9UM47 2321 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 ANKRD65E5RJM6 399 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 SLC22A1O15245 554 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 RGS10O43665 173 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 YPEL1O60688 119 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 ARL6IP5O75915 188 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 IGKV1D-33P01593 117 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 IGKV1-33P01594 117 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 IGHV3-7P01780 117 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 IGHG2P01859 326 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 HTR2CP28335 458 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 AQP4P55087 323 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 GP2P55259 537 aaKnown RBP8.02□□□□□ -1.13
USP3-207ENST00000558218 ID3Q02535 119 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 DIAPH2-AS1Q14236 149 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 HES1Q14469 280 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 BEAN1Q3B7T3 259 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 MORN2Q502X0 79 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 HSD17B12Q53GQ0 312 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 TCTEX1D4Q5JR98 221 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 PRSS48Q7RTY5 328 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 MOB3BQ86TA1 216 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 TGIF2LXQ8IUE1 241 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 FOXRED2Q8IWF2 684 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 Q8N6K4 173 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 ZNF439Q8NDP4 499 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 OR4K15Q8NH41 348 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 NRG4Q8WWG1 115 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 RTN4IP1Q8WWV3 396 aaPredicted RBP8.02□□□□□ -1.13
USP3-207ENST00000558218 UFD1Q92890 307 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 GALMQ96C23 342 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
USP3-207ENST00000558218 NEDD4LQ96PU5 975 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 YPEL2Q96QA6 119 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 TM2D1Q9BX74 207 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 GHITMQ9H3K2 345 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 TAF9BQ9HBM6 251 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 OR2S2Q9NQN1 319 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 LIN7CQ9NUP9 197 aaKnown RBP8.02□□□□□ -1.13
USP3-207ENST00000558218 GNG12Q9UBI6 72 aa8.02□□□□□ -1.13
USP3-207ENST00000558218 A0A1W2PPE3 182 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 PSMB11A5LHX3 300 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 LANCL1O43813 399 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 RGS11O94810 467 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 DUS4LO95620 317 aaKnown RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 MOSP00540 346 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 HBZP02008 142 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 CPEP16870 476 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 RCC1P18754 421 aaPredicted RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 CRHBPP24387 322 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 ZNF134P52741 427 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 RPS27AP62979 156 aaKnown RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 SLC35B1P78383 322 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 MLLT11Q13015 90 aaPredicted RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 TMEM95Q3KNT9 176 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 CT45A1Q5HYN5 189 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 RBM48Q5RL73 367 aaKnown RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 OR2W3Q7Z3T1 314 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 OR6M1Q8NGM8 313 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 CT45A3Q8NHU0 189 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 CHCHD6Q9BRQ6 235 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 URM1Q9BTM9 101 aaKnown RBP8.01□□□□□ -1.13
USP3-207ENST00000558218 TMED9Q9BVK6 235 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 TMEM59Q9BXS4 323 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 ZNF580Q9UK33 172 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 JPT1Q9UK76 154 aa8.01□□□□□ -1.13
USP3-207ENST00000558218 TRBV6-6A0A0A6YYG2 114 aa8□□□□□ -1.13
USP3-207ENST00000558218 UBE2QL1A1L167 161 aa8□□□□□ -1.13
USP3-207ENST00000558218 TMEM14DPA8MWL7 114 aa8□□□□□ -1.13
USP3-207ENST00000558218 G3V4G9 280 aa8□□□□□ -1.13
USP3-207ENST00000558218 AP4M1O00189 453 aa8□□□□□ -1.13
USP3-207ENST00000558218 MRPS14O60783 128 aaKnown RBP8□□□□□ -1.13
USP3-207ENST00000558218 MPIG6BO95866 241 aa8□□□□□ -1.13
USP3-207ENST00000558218 PF4V1P10720 104 aa8□□□□□ -1.13
USP3-207ENST00000558218 CHATP28329 748 aa8□□□□□ -1.13
USP3-207ENST00000558218 VHLP40337 213 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms