RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NAV3Q8IVL0 2385 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 A0A087X0M5 115 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 A0A1B0GX30 115 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 FABP12A6NFH5 140 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 TPPPO94811 219 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 LPLP06858 475 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 CD34P28906 385 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 LGALS4P56470 323 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 BPIFB3P59826 476 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 GNMTQ14749 295 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 Q6ZS49 121 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 HOGA1Q86XE5 327 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 OR11H6Q8NGC7 330 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 OR4A4PQ8NGN8 299 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 JPT1Q9UK76 154 aa17.32■□□□□ 0.36
CASC4-204ENST00000557945 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
CASC4-204ENST00000557945 IGKV1D-8A0A087WSZ0 117 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 HSPA12AO43301 675 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 SAA4P35542 130 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 PPP1CCP36873 323 aaKnown RBP17.31■□□□□ 0.36
CASC4-204ENST00000557945 PRRX1P54821 245 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 STEAP3Q658P3 488 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 ZNF626Q68DY1 528 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 PYHIN1Q6K0P9 492 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 FAM131AQ6UXB0 335 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 BCL6BQ8N143 479 aaPredicted RBP17.31■□□□□ 0.36
CASC4-204ENST00000557945 PIP4P2Q8N4L2 257 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 BEST4Q8NFU0 473 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 OR6Q1Q8NGQ2 317 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 OR9G1Q8NH87 305 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 SCPEP1Q9HB40 452 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 SLC23A1Q9UHI7 598 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 PSG11Q9UQ72 335 aa17.31■□□□□ 0.36
CASC4-204ENST00000557945 SOX21Q9Y651 276 aaPredicted RBP17.31■□□□□ 0.36
CASC4-204ENST00000557945 BET1O15155 118 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 SCGB2A2Q13296 93 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 MIDNQ504T8 468 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 IGSF11Q5DX21 431 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 ZNF596Q8TC21 504 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 GPX8Q8TED1 209 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 OR1A1Q9P1Q5 309 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 RABL2AQ9UBK7 228 aaPredicted RBP17.3■□□□□ 0.36
CASC4-204ENST00000557945 RABL2BQ9UNT1 228 aa17.3■□□□□ 0.36
CASC4-204ENST00000557945 IGKV1-6A0A0C4DH72 117 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 A0A1W2PPE3 182 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 ODF3BA8MYP8 253 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 SULT1C2O00338 296 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 RGS11O94810 467 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 ZBTB25P24278 435 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 ARPC4P59998 168 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 HERPUD1Q15011 391 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 MORN2Q502X0 79 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 LURAP1LQ8IV03 231 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 FCAMRQ8WWV6 532 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 ZNRD1Q9P1U0 126 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 ANXA10Q9UJ72 324 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 FAM96BQ9Y3D0 163 aa17.29■□□□□ 0.36
CASC4-204ENST00000557945 A0A0U1RQK1 487 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 J3QR06 171 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 FAM157CP0CG43 387 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 CEACAM6P40199 344 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 SPANXN2Q5MJ10 180 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 OR52I2Q8NH67 350 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 OR10J5Q8NHC4 309 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 GINS4Q9BRT9 223 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 CABLES2Q9BTV7 478 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 YPEL1O60688 119 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 HLA-DRB5Q30154 266 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 C9orf139Q6ZV77 190 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 LHFPL4Q7Z7J7 247 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 CCDC190Q86UF4 302 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 BEND2Q8NDZ0 799 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 OR10X1Q8NGY0 326 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 YPEL2Q96QA6 119 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 SOSTQ9BQB4 213 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 MMP28Q9H239 520 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 OCEL1Q9H607 264 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 PTTG2Q9NZH5 202 aa17.28■□□□□ 0.36
CASC4-204ENST00000557945 TBL2Q9Y4P3 447 aaKnown RBP17.28■□□□□ 0.36
CASC4-204ENST00000557945 GABARAPH6UMI1 98 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 SLC31A2O15432 143 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 IGLV1-47P01700 117 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 HTR1DP28221 377 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 MRPS10P82664 201 aaKnown RBP17.27■□□□□ 0.35
CASC4-204ENST00000557945 DGCR2P98153 550 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 Q3ZCU0 254 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 OR4P4Q8NGL7 312 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 C17orf50Q8WW18 174 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 SNAPC3Q92966 411 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 ANAPC10Q9UM13 185 aa17.27■□□□□ 0.35
CASC4-204ENST00000557945 AMMECR1Q9Y4X0 333 aaPredicted RBP17.27■□□□□ 0.35
CASC4-204ENST00000557945 TRBV6-7A0A0A0MS04 114 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 MDFIC2A0A1B0GVS7 189 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 BUB1B-PAK6H3BSN5 160 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 CTDSPLO15194 276 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 RBBP9O75884 186 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 CTXN2P0C2S0 81 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 RCVRNP35243 200 aa17.26■□□□□ 0.35
CASC4-204ENST00000557945 DEFB112Q30KQ8 113 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms