RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-235ENST00000557740 SOX6P35712 828 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 FOXE3Q13461 319 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
SHMT2-235ENST00000557740 GPR50Q13585 617 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 GAPTQ8N292 157 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 FAM46BQ96A09 425 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 UQCC2Q9BRT2 126 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 CST11Q9H112 138 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 TAF9BQ9HBM6 251 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 OR2S2Q9NQN1 319 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 ZMAT5Q9UDW3 170 aaKnown RBP11.51□□□□□ -0.57
SHMT2-235ENST00000557740 PSORS1C1Q9UIG5 152 aa11.51□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF736B4DX44 427 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-235ENST00000557740 CCL24O00175 119 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 LANCL1O43813 399 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 PDCD6O75340 191 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 SC5DO75845 299 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 CD1AP06126 327 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 GNAO1P09471 354 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 VDAC1P21796 283 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 VHLP40337 213 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF134P52741 427 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 GP2P55259 537 aaKnown RBP11.5□□□□□ -0.57
SHMT2-235ENST00000557740 LSAMPQ13449 338 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 MMDQ15546 238 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 STEAP3Q658P3 488 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 FAM71E2Q8N5Q1 922 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 BPIFB6Q8NFQ5 453 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 ABHD14AQ9BUJ0 271 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 PLSCR3Q9NRY6 295 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 ERGIC3Q9Y282 383 aa11.5□□□□□ -0.57
SHMT2-235ENST00000557740 H0YHG0 523 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 ELANEP08246 267 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
SHMT2-235ENST00000557740 CD69Q07108 199 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 GNMTQ14749 295 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 NEDD4LQ96PU5 975 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 HSPB9Q9BQS6 159 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 VCXQ9H320 206 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 DCLRE1BQ9H816 532 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 GHRLQ9UBU3 117 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF107Q9UII5 783 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-235ENST00000557740 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
SHMT2-235ENST00000557740 RGS11O94810 467 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 UBBP0CG47 229 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 OR5H8P0DN80 308 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 SLC2A2P11168 524 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-235ENST00000557740 MYF6P23409 242 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 F2RL1P55085 397 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 DGCR2P98153 550 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-235ENST00000557740 DEFB136Q30KP8 78 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 MORN2Q502X0 79 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 RBM48Q5RL73 367 aaKnown RBP11.48□□□□□ -0.57
SHMT2-235ENST00000557740 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 OR52L2PQ8NGH6 319 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 OR5M8Q8NGP6 311 aa11.48□□□□□ -0.57
SHMT2-235ENST00000557740 MRPL30Q8TCC3 161 aaKnown RBP11.48□□□□□ -0.57
SHMT2-235ENST00000557740 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
SHMT2-235ENST00000557740 IGHG4P01861 327 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-235ENST00000557740 CFHR3Q02985 330 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 OGFRL1Q5TC84 451 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-235ENST00000557740 GLT8D1Q68CQ7 371 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 LAIR2Q6ISS4 152 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 C11orf87Q6NUJ2 197 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 NANOGP1Q8N7R0 232 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 GALMQ96C23 342 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
SHMT2-235ENST00000557740 KCTD7Q96MP8 289 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF251Q9BRH9 671 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 MND1Q9BWT6 205 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 MRPL20Q9BYC9 149 aaKnown RBP11.47□□□□□ -0.57
SHMT2-235ENST00000557740 ABRACLQ9P1F3 81 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
SHMT2-235ENST00000557740 IGF1P05019 195 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 CHATP28329 748 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 LUMP51884 338 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-235ENST00000557740 ACTBP60709 375 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 HTD2P86397 168 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 INSL4Q14641 139 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 ACSM3Q53FZ2 586 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 TMEM65Q6PI78 240 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms