RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 OR5H8P0DN80 308 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-224ENST00000557713 CHATP28329 748 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 RUNX1Q01196 453 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 LSAMPQ13449 338 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 C6orf183Q5T699 404 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 ASPHD1Q5U4P2 390 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 RAB12Q6IQ22 244 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 OR1N2Q8NGR9 330 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 GHSRQ92847 366 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 RITA1Q96K30 269 aa12.41□□□□□ -0.42
SCFD1-224ENST00000557713 TRAV8-7A0A075B6U6 113 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 SC5DO75845 299 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 SLC2A2P11168 524 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-224ENST00000557713 INSL3P51460 131 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 RPS11P62280 158 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCFD1-224ENST00000557713 ADARB1P78563 741 aaKnown RBP12.4□□□□□ -0.42
SCFD1-224ENST00000557713 MORN2Q502X0 79 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 DMKNQ6E0U4 476 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-224ENST00000557713 TRAT1Q6PIZ9 186 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 GLIPR1L1Q6UWM5 242 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 MRPS28Q9Y2Q9 187 aaKnown RBP12.4□□□□□ -0.42
SCFD1-224ENST00000557713 PEX16Q9Y5Y5 336 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
SCFD1-224ENST00000557713 FAM90A10PA6NDY2 464 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 G3V318 75 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 CA11O75493 328 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 MYF6P23409 242 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 MMDQ15546 238 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 Q499Y3 187 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 TMEM65Q6PI78 240 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 ODF3L1Q8IXM7 274 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 MUL1Q969V5 352 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 CYYR1Q96J86 154 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 RDH12Q96NR8 316 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 TAF9BQ9HBM6 251 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
SCFD1-224ENST00000557713 CLEC2DQ9UHP7 191 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 DIMT1Q9UNQ2 313 aaKnown RBP12.39□□□□□ -0.43
SCFD1-224ENST00000557713 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
SCFD1-224ENST00000557713 DYNC2H1Q8NCM8 4307 aaKnown RBP12.39□□□□□ -0.43
SCFD1-224ENST00000557713 TRBV5-7A0A0A0MS05 114 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 FAM90A7PA6NKC0 464 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 FAM90A23PA8MXZ1 464 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 GLAP06280 429 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 OR8U8P0C7N1 319 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 FSTP19883 344 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 CNTFRP26992 372 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 RAB9AP51151 201 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 ACTBP60709 375 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 GNB1P62873 340 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF616Q08AN1 781 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 YIF1BQ5BJH7 314 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 SIGIRRQ6IA17 410 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 CDH26Q8IXH8 852 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF485Q8NCK3 441 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 OR52L2PQ8NGH6 319 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 PGLYRP3Q96LB9 341 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 BANF2Q9H503 90 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 OR2S2Q9NQN1 319 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 CKLFQ9UBR5 152 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 SMAD5-AS1Q9Y6J3 95 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
SCFD1-224ENST00000557713 DNAH7Q8WXX0 4024 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 IGHV7-81A0A0B4J1V7 117 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 ATP6V0E1O15342 81 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 FUT3P21217 361 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 GNMTQ14749 295 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF554Q86TJ5 538 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 JAGN1Q8N5M9 183 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 OR5B12Q96R08 314 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 ABHD14AQ9BUJ0 271 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 SELENOIQ9C0D9 397 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 S100A14Q9HCY8 104 aa12.37□□□□□ -0.43
SCFD1-224ENST00000557713 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
SCFD1-224ENST00000557713 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 IRGMA1A4Y4 181 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 NBR2O15453 112 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 LY86O95711 162 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 MGMTP16455 207 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 PPP1CCP36873 323 aaKnown RBP12.36□□□□□ -0.43
SCFD1-224ENST00000557713 HTD2P86397 168 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF833PQ6ZTB9 187 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms