RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 NRN1LQ496H8 165 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 TCEAL6Q6IPX3 200 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 AGBL5Q8NDL9 886 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 RNASEH2CQ8TDP1 164 aaKnown RBP10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 ADGRG7Q96K78 797 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 HIST1H2AAQ96QV6 131 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 AGMATQ9BSE5 352 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 RBKSQ9H477 322 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 NCKAP5O14513 1909 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 A0A0G2JMM0 328 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 A0A1W2PPB8 328 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 A0A1W2PRS3 328 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 KIR3DP1A8MWS1 328 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 MKRN2OSH3BPM6 223 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 TMEM241Q24JQ0 296 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 CYP2G1PQ6ZSU1 146 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 OR10V1Q8NGI7 309 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 OR1P1Q8NH06 330 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 SLC39A9Q9NUM3 307 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 PRSS50Q9UI38 385 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 GAB2Q9UQC2 676 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 WDR87Q6ZQQ6 2873 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 GDF9O60383 454 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 CYTIPO60759 359 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 IGHV3-9P01782 118 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 PFN1P07737 140 aaKnown RBP10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 RNF224P0DH78 156 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 FOSL1P15407 271 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 PAX1P15863 534 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 TAS2R60P59551 318 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 LBHQ53QV2 105 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 UNQ6494/PRO21346Q6UXR6 183 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 C20orf204Q6ZNR8 217 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 C16orf82Q7Z2V1 217 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 TGIF2LYQ8IUE0 185 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 LHX4Q969G2 390 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 CRIM1Q9NZV1 1036 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 PI4KAP42356 2102 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 HS3ST1O14792 307 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 DEGS1O15121 323 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 SYNGR1O43759 233 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 ELLP55199 621 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 COL10A1Q03692 680 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 Q3ZCU0 254 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 OR5A2Q8NGI9 324 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 ABHD3Q8WU67 409 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 RDH5Q92781 318 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 OR5B12Q96R08 314 aa10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 PHF7Q9BWX1 381 aaPredicted RBP10.06□□□□□ -0.8
VIPAS39-211ENST00000557658 C5orf49A4QMS7 147 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 KBTBD11O94819 623 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 AMBPP02760 352 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 LBX1P52954 281 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 WIPI1Q5MNZ9 446 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 SPEM1Q8N4L4 309 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 OR2Y1Q8NGV0 311 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 APOBEC3DQ96AK3 386 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 TMEM45BQ96B21 275 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 LAMP3Q9UQV4 416 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 KIAA2026Q5HYC2 2103 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 H7BYZ3 331 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 MRPL33O75394 65 aaKnown RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 IGKV1-5P01602 117 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 RFPL3SP0C7P2 107 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 GZMBP10144 247 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 TUBG1P23258 451 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 SPANXN5Q5MJ07 72 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 SLC23A3Q6PIS1 610 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 BEND4Q6ZU67 534 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 IL1F10Q8WWZ1 152 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF845Q96IR2 970 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 NOL4LQ96MY1 436 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 TIMM9Q9Y5J7 89 aa10.05□□□□□ -0.8
VIPAS39-211ENST00000557658 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 XKRY2A2RUG3 117 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 ARGFXA6NJG6 315 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 CD55P08174 381 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 GALR1P47211 349 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 SLC38A11Q08AI6 406 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 NECAP1Q8NC96 275 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 C2orf88Q9BSF0 95 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms