RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SLC6A1P30531 599 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 INSL4Q14641 139 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 SPHARQ15513 63 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 MORN2Q502X0 79 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 LY6G6FQ5SQ64 297 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 C1orf100Q5SVJ3 147 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 C6orf183Q5T699 404 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 FOXB2Q5VYV0 432 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 TRAT1Q6PIZ9 186 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 MOB3BQ86TA1 216 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 ZNF329Q86UD4 541 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 LRRTM1Q86UE6 522 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 Q8N9W7 124 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 OR8H1Q8NGG4 311 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 NEK7Q8TDX7 302 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 PHYHIPQ92561 330 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 SGCDQ92629 289 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 PHF21AQ96BD5 680 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
PSMC6-215ENST00000557517 LSM2Q9Y333 95 aaKnown RBP8.35□□□□□ -1.07
PSMC6-215ENST00000557517 LRRC42Q9Y546 428 aa8.35□□□□□ -1.07
PSMC6-215ENST00000557517 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 SERPINE3A8MV23 424 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 ZNF736B4DX44 427 aaPredicted RBP8.34□□□□□ -1.07
PSMC6-215ENST00000557517 PTGES3LE9PB15 166 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 SLC31A2O15432 143 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 TXNL1O43396 289 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 PDCD6O75340 191 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 CRTAPO75718 401 aaPredicted RBP8.34□□□□□ -1.07
PSMC6-215ENST00000557517 HBZP02008 142 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 UBBP0CG47 229 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 PF4V1P10720 104 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 IL3RAP26951 378 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 REG1BP48304 166 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 HTD2P86397 168 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 IRF3Q14653 427 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 SLC35E3Q7Z769 313 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 OR1L1Q8NH94 360 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 UBALD1Q8TB05 177 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 RCC1LQ96I51 464 aaKnown RBP8.34□□□□□ -1.07
PSMC6-215ENST00000557517 NOL4LQ96MY1 436 aaPredicted RBP8.34□□□□□ -1.07
PSMC6-215ENST00000557517 MND1Q9BWT6 205 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 CST11Q9H112 138 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 VCXQ9H320 206 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 DUSP21Q9H596 190 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 TAF9BQ9HBM6 251 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 OR2S2Q9NQN1 319 aa8.34□□□□□ -1.07
PSMC6-215ENST00000557517 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.07
PSMC6-215ENST00000557517 IGHV3-72A0A0B4J1Y9 119 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 UBE2QL1A1L167 161 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 NCBP2LA6PVI3 153 aaKnown RBP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 ANKRD65E5RJM6 399 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 SLC22A1O15245 554 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 LANCL1O43813 399 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 YPEL1O60688 119 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 MOSP00540 346 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 THBS3P49746 956 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 RPL23AP62750 156 aaKnown RBP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 SLC35A2P78381 396 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 SLC35B1P78383 322 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 QRFPP83859 136 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 TPBGQ13641 420 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 FAM27D1Q5T7N8 215 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 GLT8D1Q68CQ7 371 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 C8orf86Q6ZUL3 223 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 FOXRED2Q8IWF2 684 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 MRPL41Q8IXM3 137 aaKnown RBP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 STPG2Q8N412 459 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 LINC00482Q8N8I6 264 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 RNF152Q8N8N0 203 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 MRPL30Q8TCC3 161 aaKnown RBP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 NRG4Q8WWG1 115 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 CYYR1Q96J86 154 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 S1PR3Q99500 378 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 TM2D1Q9BX74 207 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 GON7Q9BXV9 100 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 AURKAIP1Q9NWT8 199 aaPredicted RBP8.33□□□□□ -1.08
PSMC6-215ENST00000557517 SCN3BQ9NY72 215 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 GNG12Q9UBI6 72 aa8.33□□□□□ -1.08
PSMC6-215ENST00000557517 DNAH3Q8TD57 4116 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 AP4M1O00189 453 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 PF4P02776 101 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 IGF1P05019 195 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 UCHL1P09936 223 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 CHATP28329 748 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 HTR2CP28335 458 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 MYCNOSP40205 109 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 GPR12P47775 334 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 F2RL1P55085 397 aa8.32□□□□□ -1.08
PSMC6-215ENST00000557517 RPS27AP62979 156 aaKnown RBP8.32□□□□□ -1.08
PSMC6-215ENST00000557517 GABPB1Q06547 395 aaPredicted RBP8.32□□□□□ -1.08
PSMC6-215ENST00000557517 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms