RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 SDC2P34741 201 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 KIR2DS4P43632 304 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 TMEM50BP56557 158 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 MRPS15P82914 257 aaKnown RBP10.04□□□□□ -0.8
SLIRP-209ENST00000557342 HMGN3Q15651 99 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 STEAP3Q658P3 488 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 C11orf88Q6PI97 169 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 CCBE1Q6UXH8 406 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-209ENST00000557342 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 OR8H3Q8N146 312 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 SETD6Q8TBK2 473 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 CAPSLQ8WWF8 208 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 RAB3CQ96E17 227 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 AKR1E2Q96JD6 320 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 CMSS1Q9BQ75 279 aaKnown RBP10.04□□□□□ -0.8
SLIRP-209ENST00000557342 PECRQ9BY49 303 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 OR2S2Q9NQN1 319 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 AK3Q9UIJ7 227 aa10.04□□□□□ -0.8
SLIRP-209ENST00000557342 A0A1W2PPE3 182 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 SMIM30A4D0T7 59 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 CHST1O43916 411 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 YPEL1O60688 119 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 TMEM127O75204 238 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
SLIRP-209ENST00000557342 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-209ENST00000557342 SCAND1P57086 179 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 ZNF816Q0VGE8 651 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-209ENST00000557342 ARL6IP1Q15041 203 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 MORN2Q502X0 79 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
SLIRP-209ENST00000557342 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 OR10V1Q8NGI7 309 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 OR13F1Q8NGS4 319 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 WFDC12Q8WWY7 111 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 CENPOQ9BU64 300 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 DAPK2Q9UIK4 370 aa10.03□□□□□ -0.8
SLIRP-209ENST00000557342 A0A0B4J203 849 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 SERPINE3A8MV23 424 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 HSD17B6O14756 317 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 TXNL1O43396 289 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 AIREO43918 545 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 SCGNO76038 276 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 CD3GP09693 182 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 EFNB2P52799 333 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 PROK1P58294 105 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 MXD1Q05195 221 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 PLA2G7Q13093 441 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 GPR141Q7Z602 305 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 CROCCP3Q8IVE0 287 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 ZNF439Q8NDP4 499 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 OR52L2PQ8NGH6 319 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 SGMS2Q8NHU3 365 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 CYYR1Q96J86 154 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 RBM14Q96PK6 669 aaKnown RBP10.02□□□□□ -0.81
SLIRP-209ENST00000557342 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 ATG5Q9H1Y0 275 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 RNF167Q9H6Y7 350 aa10.02□□□□□ -0.81
SLIRP-209ENST00000557342 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 FAM90A9PA6NNJ1 464 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 RAB27BO00194 218 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 TIMM23O14925 209 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 OR2F2O95006 317 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 HIST1H1DP16402 221 aaKnown RBP10.01□□□□□ -0.81
SLIRP-209ENST00000557342 CD24P25063 80 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 ZNF137PP52743 207 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 HLA-DRB3P79483 266 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 MOGAT2Q3SYC2 334 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 CT45A1Q5HYN5 189 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 Q8N2B8 174 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 OR56B4Q8NH76 319 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 CT45A3Q8NHU0 189 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 IL1F10Q8WWZ1 152 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 HDHD3Q9BSH5 251 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-209ENST00000557342 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 Q9N2K0 584 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 NDUFA13Q9P0J0 144 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
SLIRP-209ENST00000557342 IGHV1-3A0A0C4DH29 117 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 DPPA5A6NC42 116 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 A6NHS1 94 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 M0QZK8 103 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 MFNGO00587 321 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 SLC31A2O15432 143 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms