RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 RHBDL2Q9NX52 303 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 MGAT4AQ9UM21 535 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 KCNK7Q9Y2U2 307 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 A0A1W2PPE3 182 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 SERPINE3A8MV23 424 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 MFNGO00587 321 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 HKR1P10072 659 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 RPL15P61313 204 aaKnown RBP10.97□□□□□ -0.65
SHMT2-228ENST00000557302 MADCAM1Q13477 382 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 LY6EQ16553 131 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 TPTE2P1Q5T6R2 138 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 OLFML2AQ68BL7 652 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 Q6ZPA2 131 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 C8orf31Q8N9H6 132 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 OR10V1Q8NGI7 309 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 OR5H6Q8NGV6 325 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 SLC25A46Q96AG3 418 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 RPEQ96AT9 228 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 PHF21AQ96BD5 680 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 GALMQ96C23 342 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 NAA50Q9GZZ1 169 aaKnown RBP10.97□□□□□ -0.65
SHMT2-228ENST00000557302 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
SHMT2-228ENST00000557302 ANK2Q01484 3957 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 OOSP1A8MZH6 123 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 LY6LH3BQJ8 138 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 DYNLT3P51808 116 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 HTD2P86397 168 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 ARFRP1Q13795 201 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 CTF1Q16619 201 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 DHRS7BQ6IAN0 325 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-228ENST00000557302 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-228ENST00000557302 CCDC144NLQ6NUI1 221 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 LINC00311Q8N616 119 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 OR52L2PQ8NGH6 319 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 PIFOQ8TCI5 191 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 IL1F10Q8WWZ1 152 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 TOMM40LQ969M1 308 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 SLC25A38Q96DW6 304 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 OCSTAMPQ9BR26 566 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 Q9N2K0 584 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 SPATA2Q9UM82 520 aa10.96□□□□□ -0.65
SHMT2-228ENST00000557302 RGS11O94810 467 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 IL3RAP26951 378 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 BRS3P32247 399 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 PPP1CCP36873 323 aaKnown RBP10.95□□□□□ -0.66
SHMT2-228ENST00000557302 MNDAP41218 407 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
SHMT2-228ENST00000557302 RAB13P51153 203 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 HLA-DRB3P79483 266 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 FOXL1Q12952 345 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 GNMTQ14749 295 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 CDNFQ49AH0 187 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 STEAP3Q658P3 488 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 LIAT1Q6ZQX7 453 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
SHMT2-228ENST00000557302 RAB18Q9NP72 206 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.95□□□□□ -0.66
SHMT2-228ENST00000557302 C1RLQ9NZP8 487 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
SHMT2-228ENST00000557302 A0A0A6YYH2 397 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 A6NJ64 397 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 SLC31A2O15432 143 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 YPEL1O60688 119 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 FCGR3AP08637 254 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 GSTP1P09211 210 aaKnown RBP10.94□□□□□ -0.66
SHMT2-228ENST00000557302 TALDO1P37837 337 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 COMPP49747 757 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-228ENST00000557302 RAB7AP51149 207 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 RAG2P55895 527 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 MORN2Q502X0 79 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 CT45A1Q5HYN5 189 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 C12orf54Q6X4T0 127 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 SLC25A48Q6ZT89 311 aaKnown RBP10.94□□□□□ -0.66
SHMT2-228ENST00000557302 CLVS1Q8IUQ0 354 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-228ENST00000557302 CT45A3Q8NHU0 189 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 TAF15Q92804 592 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHMT2-228ENST00000557302 YPEL2Q96QA6 119 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 DCSTAMPQ9H295 470 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 SCOCQ9UIL1 159 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 PITPNC1Q9UKF7 332 aa10.94□□□□□ -0.66
SHMT2-228ENST00000557302 A6NDX4 124 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 TMEM235A6NFC5 223 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 TRDCB7Z8K6 153 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 HSD17B6O14756 317 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 HSPA12AO43301 675 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 NDUFA7O95182 113 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 KIR2DS4P43632 304 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 RORCP51449 518 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 ZNF134P52741 427 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 GNG2P59768 71 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 KIR2DS1Q14954 304 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 UBE2NLQ5JXB2 153 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 LY6G6FQ5SQ64 297 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 HACD4Q5VWC8 232 aa10.93□□□□□ -0.66
SHMT2-228ENST00000557302 OR8H3Q8N146 312 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms