RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 CEACAM1P13688 526 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 UBE2NP61088 152 aaKnown RBP19.1■□□□□ 0.65
RCCD1-208ENST00000557266 MRPL49Q13405 166 aaKnown RBP19.1■□□□□ 0.65
RCCD1-208ENST00000557266 SHEQ5VZ18 495 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 SLC25A40Q8TBP6 338 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 ISOC2Q96AB3 205 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 ZNF292O60281 2723 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 RBFOX3A6NFN3 312 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 TNFSF10P50591 281 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 ZNF146Q15072 292 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 SMDT1Q9H4I9 107 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 TUBA4BQ9H853 241 aa19.1■□□□□ 0.65
RCCD1-208ENST00000557266 MBNL3Q9NUK0 354 aaKnown RBP19.1■□□□□ 0.65
RCCD1-208ENST00000557266 PIGBOS1A0A0B4J2F0 54 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 NXPH2O95156 264 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 IGKV1-5P01602 117 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 TMEM267Q0VDI3 215 aaPredicted RBP19.09■□□□□ 0.65
RCCD1-208ENST00000557266 STX12Q86Y82 276 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 DEFB124Q8NES8 71 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 RNASE11Q8TAA1 199 aaKnown RBP19.09■□□□□ 0.65
RCCD1-208ENST00000557266 LSM10Q969L4 123 aaKnown RBP19.09■□□□□ 0.65
RCCD1-208ENST00000557266 CLCF1Q9UBD9 225 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 CACNG5Q9UF02 275 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 URB1O60287 2271 aaKnown RBP19.09■□□□□ 0.65
RCCD1-208ENST00000557266 RAC2P15153 192 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 SULT1A1P50225 295 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 TGFBR3Q03167 851 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 RHEBQ15382 184 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 SNIP1Q8TAD8 396 aaKnown RBP19.09■□□□□ 0.65
RCCD1-208ENST00000557266 RAB40CQ96S21 281 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 KIAA1456Q9P272 454 aa19.09■□□□□ 0.65
RCCD1-208ENST00000557266 BTBD17A6NE02 478 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 IQCF6A8MYZ5 107 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 H0YL77 283 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 MT-ND4LP03901 98 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 SELEP16581 610 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 PTAFRP25105 342 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 RPL23AP62750 156 aaKnown RBP19.08■□□□□ 0.64
RCCD1-208ENST00000557266 PSG7Q13046 419 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 ZNF585BQ52M93 769 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 OR1J1Q8NGS3 322 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 KCNS2Q9ULS6 477 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 WIPI2Q9Y4P8 454 aa19.08■□□□□ 0.64
RCCD1-208ENST00000557266 A0A1W2PPH5 198 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 A6NLC8 198 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 TAS2R30P59541 319 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 SOHLH1Q5JUK2 328 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 AKR1C8PQ5T2L2 129 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 WSB1Q9Y6I7 421 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 SH2D1BO14796 132 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 CNOT4O95628 575 aaKnown RBP19.07■□□□□ 0.64
RCCD1-208ENST00000557266 GRPP07492 148 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 SOX8P57073 446 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 RAB5BP61020 215 aa19.07■□□□□ 0.64
RCCD1-208ENST00000557266 RBM7Q9Y580 266 aaKnown RBP19.07■□□□□ 0.64
RCCD1-208ENST00000557266 DFFBO76075 338 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 WISP2O76076 250 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 MPV17P39210 176 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 CEBPDP49716 269 aaPredicted RBP19.06■□□□□ 0.64
RCCD1-208ENST00000557266 GABRA6Q16445 453 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 RNF212Q495C1 297 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 LIN7CQ9NUP9 197 aaKnown RBP19.06■□□□□ 0.64
RCCD1-208ENST00000557266 COA4Q9NYJ1 87 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 ZNF98A6NK75 572 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 WDR1O75083 606 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 CEACAM6P40199 344 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 HAGHQ16775 308 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 FAM214BQ7L5A3 538 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 SFT2D1Q8WV19 159 aa19.06■□□□□ 0.64
RCCD1-208ENST00000557266 PRRC2CQ9Y520 2896 aaKnown RBP19.05■□□□□ 0.64
RCCD1-208ENST00000557266 A0A1W2PPE2 198 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 SYNGR2O43760 224 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 ARG1P05089 322 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 FTH1P19P0C7X4 201 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 IAPPP10997 89 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 ZNF16P17020 682 aaPredicted RBP19.05■□□□□ 0.64
RCCD1-208ENST00000557266 DRAM1Q8N682 238 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 TRIB1Q96RU8 372 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 HIPK2Q9H2X6 1198 aa19.05■□□□□ 0.64
RCCD1-208ENST00000557266 PUS1Q9Y606 427 aaKnown RBP eCLIP19.05■□□□□ 0.64
RCCD1-208ENST00000557266 C1orf196B1AJZ1 125 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 PSPNO60542 156 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 HAND1O96004 215 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 IGHG3P01860 377 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 GUSBP1Q15486 140 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 KRBOX4Q5JUW0 171 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 INO80CQ6PI98 192 aaPredicted RBP19.04■□□□□ 0.64
RCCD1-208ENST00000557266 Q6ZT83 130 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 THNSL2Q86YJ6 484 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 KLF14Q8TD94 323 aaPredicted RBP19.04■□□□□ 0.64
RCCD1-208ENST00000557266 HES4Q9HCC6 221 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 OR14J1Q9UGF5 321 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 RIF1Q5UIP0 2472 aaKnown RBP19.04■□□□□ 0.64
RCCD1-208ENST00000557266 SRSF6Q13247 344 aaKnown RBP19.04■□□□□ 0.64
RCCD1-208ENST00000557266 ICAM4Q14773 271 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 DPPA3Q6W0C5 159 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 TINAGQ9UJW2 476 aa19.04■□□□□ 0.64
RCCD1-208ENST00000557266 SPAARA0A1B0GVQ0 90 aa19.03■□□□□ 0.64
RCCD1-208ENST00000557266 TMEM210A6NLX4 147 aa19.03■□□□□ 0.64
RCCD1-208ENST00000557266 SRP19P09132 144 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms