RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ZNF616Q08AN1 781 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 OR2G6Q5TZ20 316 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 GAPTQ8N292 157 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF491Q8N8L2 437 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 SMIM19Q96E16 107 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 CHCHD6Q9BRQ6 235 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 VSIG4Q9Y279 399 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 WSB1Q9Y6I7 421 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 TENM2Q9NT68 2774 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 LOC100130705A0A1B0GUX0 176 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 MCRIP1C9JLW8 97 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 ATP6V0E1O15342 81 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 IGLV1-40P01703 118 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 GPR176Q14439 515 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 SMN1Q16637 294 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 RAB12Q6IQ22 244 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 ZFP1Q6P2D0 407 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 TMEM65Q6PI78 240 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 TRAT1Q6PIZ9 186 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 MUC7Q8TAX7 377 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 OR5B12Q96R08 314 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 ISYNA1Q9NPH2 558 aa14.21□□□□□ -0.13
VIPAS39-209ENST00000556909 TRAV8-7A0A075B6U6 113 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 TRBV5-5A0A0J9YX44 114 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 OGG1O15527 345 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 HLA-DRB1P01911 266 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 RCC1P18754 421 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 CNTFRP26992 372 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 ACTBP60709 375 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 ADARB1P78563 741 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 GNMTQ14749 295 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 CASC10Q5T4H9 136 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 STEAP3Q658P3 488 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 TMPRSS11AQ6ZMR5 421 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 SBSPONQ8IVN8 264 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 MUL1Q969V5 352 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 CYYR1Q96J86 154 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 RCHY1Q96PM5 261 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 SLC29A1Q99808 456 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 C9orf16Q9BUW7 83 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 OR51J1Q9H342 316 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 PARP11Q9NR21 331 aa14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 MRPS28Q9Y2Q9 187 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-209ENST00000556909 IGHV7-81A0A0B4J1V7 117 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 WBP4O75554 376 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 GPX5O75715 221 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 SC5DO75845 299 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 LALBAP00709 142 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 FAM27D1Q5T7N8 215 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 GLIPR1L1Q6UWM5 242 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 ZNF429Q86V71 674 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 ODF3L1Q8IXM7 274 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 MRPS24Q96EL2 167 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 RITA1Q96K30 269 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 ABHD14AQ9BUJ0 271 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 MRPL20Q9BYC9 149 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 TAF9BQ9HBM6 251 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 OR2S2Q9NQN1 319 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 CKLFQ9UBR5 152 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 PEX16Q9Y5Y5 336 aa14.19□□□□□ -0.14
VIPAS39-209ENST00000556909 LYSTQ99698 3801 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 TRAV41A0A0B4J266 112 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 FAM90A10PA6NDY2 464 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 OVOL1O14753 267 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 FSTP19883 344 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 DCKP27707 260 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 BLVRBP30043 206 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 RPS11P62280 158 aaKnown RBP eCLIP14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 Q499Y3 187 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 MORN2Q502X0 79 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 DMKNQ6E0U4 476 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 JAGN1Q8N5M9 183 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 DCUN1D4Q92564 292 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 GHSRQ92847 366 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 NABP2Q9BQ15 211 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 ZNF251Q9BRH9 671 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 ANKRD60Q9BZ19 345 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 BANF2Q9H503 90 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 MBNL3Q9NUK0 354 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 BABAM2Q9NXR7 383 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 JPT1Q9UK76 154 aa14.18□□□□□ -0.14
VIPAS39-209ENST00000556909 DYNC1I1O14576 645 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 NBR2O15453 112 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 CA11O75493 328 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 PPP1CCP36873 323 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 RAB9AP51151 201 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 C5orf64Q2M2E5 130 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 AWAT2Q6E213 333 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 OVCH2Q7RTZ1 564 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 C5orf24Q7Z6I8 188 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 MINDY2Q8NBR6 621 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 OR52L2PQ8NGH6 319 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 PGLYRP3Q96LB9 341 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 RDH12Q96NR8 316 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 SELENOIQ9C0D9 397 aa14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 ALX4Q9H161 411 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-209ENST00000556909 CSMD3Q7Z407 3707 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 TRBV5-7A0A0A0MS05 114 aa14.16□□□□□ -0.14
VIPAS39-209ENST00000556909 UBE2QL1A1L167 161 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms