RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TRIM77I1YAP6 450 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 SLC31A2O15432 143 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 EIF4EP06730 217 aaKnown RBP14.14□□□□□ -0.15
SHMT2-225ENST00000556798 GSTP1P09211 210 aaKnown RBP14.14□□□□□ -0.15
SHMT2-225ENST00000556798 SCTP09683 121 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 PPP1CCP36873 323 aaKnown RBP14.14□□□□□ -0.15
SHMT2-225ENST00000556798 ARL6IP1Q15041 203 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 HACD4Q5VWC8 232 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 SSMEM1Q8WWF3 244 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 MALSU1Q96EH3 234 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 SSX3Q99909 188 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 CHIAQ9BZP6 476 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 ABCG5Q9H222 651 aa14.14□□□□□ -0.15
SHMT2-225ENST00000556798 H3BUX3 64 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 HPGDSO60760 199 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 PTHLHP12272 177 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 ZNF182P17025 639 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-225ENST00000556798 TALDO1P37837 337 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 GNG2P59768 71 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 LRRC75BQ2VPJ9 315 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 TMEM30BQ3MIR4 351 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-225ENST00000556798 ZNF439Q8NDP4 499 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 OR10X1Q8NGY0 326 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 ACOT12Q8WYK0 555 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 AP3S1Q92572 193 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 GALMQ96C23 342 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 MEGF9Q9H1U4 602 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 DIABLOQ9NR28 239 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 DPM3Q9P2X0 92 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 JPT1Q9UK76 154 aa14.13□□□□□ -0.15
SHMT2-225ENST00000556798 A0A0A6YYH2 397 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 A6NJ64 397 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 RNF212BA8MTL3 300 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 LEUTXA8MZ59 168 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 CLDN34H7C241 214 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 RNASE1P07998 156 aaKnown RBP14.12□□□□□ -0.15
SHMT2-225ENST00000556798 RAB13P51153 203 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 ZNF134P52741 427 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 HTD2P86397 168 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 DIAPH2-AS1Q14236 149 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 TPTE2P1Q5T6R2 138 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 DYNC2LI1Q8TCX1 351 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 TAF15Q92804 592 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHMT2-225ENST00000556798 S100A16Q96FQ6 103 aaKnown RBP14.12□□□□□ -0.15
SHMT2-225ENST00000556798 RBM38Q9H0Z9 239 aaKnown RBP14.12□□□□□ -0.15
SHMT2-225ENST00000556798 DPAGT1Q9H3H5 408 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 OR1A1Q9P1Q5 309 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 SLC23A1Q9UHI7 598 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 MGAT4AQ9UM21 535 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 AMMECR1Q9Y4X0 333 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-225ENST00000556798 POMT1Q9Y6A1 747 aa14.12□□□□□ -0.15
SHMT2-225ENST00000556798 IGKV1D-8A0A087WSZ0 117 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 BTBD17A6NE02 478 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 TRDCB7Z8K6 153 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 LY6LH3BQJ8 138 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 XRCC3O43542 346 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 SSX5O60225 188 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 SOX6P35712 828 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 MADCAM1Q13477 382 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 HERPUD1Q15011 391 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 LY6EQ16553 131 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 PNLIPRP3Q17RR3 467 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 KRTAP21-3Q3LHN1 58 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 MORN2Q502X0 79 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 TMEM69Q5SWH9 247 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 MZT2AQ6P582 158 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 TMEM86BQ8N661 226 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 AUNIPQ9H7T9 357 aa14.11□□□□□ -0.15
SHMT2-225ENST00000556798 POM121CA8CG34 1229 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 FABP7O15540 132 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 APOA1P02647 267 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 GSTT2P0CG29 244 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 GSTT2BP0CG30 244 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 ELK1P19419 428 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 DTYMKP23919 212 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 CEACAM3P40198 252 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 TAS2R20P59543 309 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 Q3ZCU0 254 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 CT45A1Q5HYN5 189 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 STEAP3Q658P3 488 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 SLC25A48Q6ZT89 311 aaKnown RBP14.1□□□□□ -0.15
SHMT2-225ENST00000556798 LINC00311Q8N616 119 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 C8orf31Q8N9H6 132 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 CT45A3Q8NHU0 189 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 PIFOQ8TCI5 191 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 FAM216AQ8WUB2 273 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 ZFAND2BQ8WV99 257 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 TMEM158Q8WZ71 300 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 GCDHQ92947 438 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-225ENST00000556798 TOMM40LQ969M1 308 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 RPEQ96AT9 228 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 CREB3L1Q96BA8 519 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 MDFIQ99750 246 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 OCSTAMPQ9BR26 566 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 ABHD14AQ9BUJ0 271 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 ST6GALNAC5Q9BVH7 336 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 C19orf24Q9BVV8 132 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 PARP12Q9H0J9 701 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms