RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 S100A13Q99584 98 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 GABARAPL1Q9H0R8 117 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 LHX9Q9NQ69 397 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 HEBP1Q9NRV9 189 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 SCML1Q9UN30 329 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 COQ4Q9Y3A0 265 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 PLIN4Q96Q06 1357 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 DDX60Q8IY21 1712 aaKnown RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 PIK3C2BO00750 1634 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 A0A096LNJ9 63 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 A0A0D9SG52 128 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 A0A0J9YXV3 536 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 IGHV5-10-1A0A0J9YXX1 117 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 A0A1B0GV90 55 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 TMEM72A0PK05 275 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 C7orf66A4D0T2 115 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 NAP1L6A6NFF2 107 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 HMSDA8MTL9 139 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 SEC14L6B5MCN3 397 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PANO1I0J062 215 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 M0QYV0 167 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 POP7O75817 140 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 NSA2O95478 260 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 METTL15P1P0C7V9 234 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 HTR2CP28335 458 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 DDTP30046 118 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PMELP40967 661 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 MAGEA12P43365 314 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 SRP9P49458 86 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 POLR2JP52435 117 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 HCCSP53701 268 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CTBP2P56545 445 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CDC42P60953 191 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 RPL18AQ02543 176 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 C2orf80Q0P641 193 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 LGALSLQ3ZCW2 172 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CPTPQ5TA50 214 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 KDM4DQ6B0I6 523 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 TBPL2Q6SJ96 375 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CD300LGQ6UXG3 332 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 LRRN1Q6UXK5 716 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 AHSA2Q719I0 299 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 MRPL52Q86TS9 123 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 RBM45Q8IUH3 476 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 OR6V1Q8N148 313 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 GPR26Q8NDV2 337 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 OR8J3Q8NGG0 315 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 OR1J4Q8NGS1 313 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 RERGQ96A58 199 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PTX4Q96A99 478 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PPP1R36Q96LQ0 422 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 KCTD7Q96MP8 289 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 VAT1Q99536 393 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 SDHCQ99643 169 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 MGLLQ99685 303 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CDCA4Q9BXL8 241 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 DHX35Q9H5Z1 703 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 METTL8Q9H825 291 aaKnown RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 SPACA1Q9HBV2 294 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 ABCB9Q9NP78 766 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 NLE1Q9NVX2 485 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 RBAKQ9NYW8 714 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 CALML5Q9NZT1 146 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 POFUT2Q9Y2G5 429 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PRG3Q9Y2Y8 225 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 PCYT1BQ9Y5K3 369 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 OR51B2Q9Y5P1 312 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF142P52746 1687 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-210ENST00000556718 KIF1AQ12756 1690 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 LMO7Q8WWI1 1683 aa2.84□□□□□ -1.95
PRPF39-210ENST00000556718 RGPD1P0DJD0 1748 aa2.84□□□□□ -1.96
PRPF39-210ENST00000556718 TIAM2Q8IVF5 1701 aa2.84□□□□□ -1.96
PRPF39-210ENST00000556718 CCDC88AQ3V6T2 1871 aa2.84□□□□□ -1.96
PRPF39-210ENST00000556718 MEGF6O75095 1541 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TRPM3Q9HCF6 1732 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-210ENST00000556718 NWD2Q9ULI1 1742 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 LAMB1P07942 1786 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SMIM26A0A096LP01 95 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 LOC285095A0A1B0GVY8 99 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 KANTRA0A1W2PQU2 76 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 GPR171O14626 319 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ITGB1BP1O14713 200 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 AZIN1O14977 448 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 PLA2G10O15496 165 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TGOLN2O43493 480 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SLC37A4O43826 429 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TRAPPC6AO75865 159 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OXTP01178 125 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 CRYBA1P05813 215 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 GP1BAP07359 652 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 NMBP08949 121 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SULT1A3P0DMM9 295 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SULT1A4P0DMN0 295 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 COX5BP10606 129 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SLC6A1P30531 599 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 MYCNOSP40205 109 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms