RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PDCD5O14737 125 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 LDLRAD4O15165 306 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 CA11O75493 328 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 OR2F2O95006 317 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 SLC2A2P11168 524 aaPredicted RBP8.28□□□□□ -1.08
SNX6-208ENST00000556712 RAB3BP20337 219 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 VDAC2P45880 294 aaPredicted RBP8.28□□□□□ -1.08
SNX6-208ENST00000556712 VEGFCP49767 419 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 RAB7AP51149 207 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 ZNF134P52741 427 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 HES1Q14469 280 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 HERPUD1Q15011 391 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 HMGN3Q15651 99 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 C2orf76Q3KRA6 126 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 TRAT1Q6PIZ9 186 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 SLC16A12Q6ZSM3 486 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 LYG1Q8N1E2 194 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 OR52M1Q8NGK5 317 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 ARHGAP5-AS1Q96IT6 56 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 RBM14Q96PK6 669 aaKnown RBP8.28□□□□□ -1.08
SNX6-208ENST00000556712 URM1Q9BTM9 101 aaKnown RBP8.28□□□□□ -1.08
SNX6-208ENST00000556712 PRSS22Q9GZN4 317 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 OR51E2Q9H255 320 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 LIN7BQ9HAP6 207 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 PLEKHJ1Q9NW61 149 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 KCNIP1Q9NZI2 227 aa8.28□□□□□ -1.08
SNX6-208ENST00000556712 TRAV1-2A0A0B4J238 106 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 IFITM5A6NNB3 132 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 FAM90A9PA6NNJ1 464 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 M0QZ24 198 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 NAPSAO96009 420 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 IGKV1D-33P01593 117 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 IGKV1-33P01594 117 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 AMY1AP04745 511 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 AMY2AP04746 511 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 LPLP06858 475 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 CD28P10747 220 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 TMEM11P17152 192 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 IL3RAP26951 378 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 ZNF816Q0VGE8 651 aaPredicted RBP8.27□□□□□ -1.09
SNX6-208ENST00000556712 HNF4GQ14541 408 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 MOGAT2Q3SYC2 334 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 KCTD21Q4G0X4 260 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 ABCA11PQ4W5N1 156 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 CT45A1Q5HYN5 189 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 SLC25A48Q6ZT89 311 aaKnown RBP8.27□□□□□ -1.09
SNX6-208ENST00000556712 Q6ZTK2 550 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 C16orf82Q7Z2V1 217 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 MOB3BQ86TA1 216 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 OR8H3Q8N146 312 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 FAM89BQ8N5H3 189 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.09
SNX6-208ENST00000556712 IL1F10Q8WWZ1 152 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 ABHD14AQ9BUJ0 271 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 PECRQ9BY49 303 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 RNF167Q9H6Y7 350 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 RAB9BQ9NP90 201 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 OR2S2Q9NQN1 319 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 STUB1Q9UNE7 303 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 MOB4Q9Y3A3 225 aa8.27□□□□□ -1.09
SNX6-208ENST00000556712 ZNF736B4DX44 427 aaPredicted RBP8.26□□□□□ -1.09
SNX6-208ENST00000556712 H3BUI4 141 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 PEX14O75381 377 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 GAPDHP04406 335 aaKnown RBP8.26□□□□□ -1.09
SNX6-208ENST00000556712 CLEC2LP0C7M8 214 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 FAM106CPP0CH98 169 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 GALP22466 123 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 GADD45AP24522 165 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 TMEM50BP56557 158 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 HLA-DRB3P79483 266 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 TMEM30BQ3MIR4 351 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 Q3ZCU0 254 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 MORN2Q502X0 79 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 C9orf152Q5JTZ5 239 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 ZNF880Q6PDB4 577 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 FAM110DQ8TAY7 271 aaPredicted RBP8.26□□□□□ -1.09
SNX6-208ENST00000556712 ST6GALNAC6Q969X2 333 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 AKR1E2Q96JD6 320 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 CHCHD6Q9BRQ6 235 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 PARP12Q9H0J9 701 aaKnown RBP8.26□□□□□ -1.09
SNX6-208ENST00000556712 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 JPT1Q9UK76 154 aa8.26□□□□□ -1.09
SNX6-208ENST00000556712 PKD1L1Q8TDX9 2849 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 A0A075B6Q4 140 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 LOC100506127A0A0U1RQW1 187 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 FBXO24O75426 580 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 FGF9P31371 208 aaPredicted RBP8.25□□□□□ -1.09
SNX6-208ENST00000556712 TGFBR1P36897 503 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 OR3A3P47888 321 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 PSMD7P51665 324 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 ZNF137PP52743 207 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 HTD2P86397 168 aa8.25□□□□□ -1.09
SNX6-208ENST00000556712 C2orf68Q2NKX9 166 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms