RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ZNF691Q5VV52 312 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 C1orf146Q5VVC0 180 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 FAM90A2PQ658T7 463 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 TGIF2LXQ8IUE1 241 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 IZUMO1Q8IYV9 350 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 Q8N6K4 173 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 OR52M1Q8NGK5 317 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 LGALS12Q96DT0 336 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 PPP1R14DQ9NXH3 145 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 IDI2-AS1Q9NZ38 188 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 ZNF580Q9UK33 172 aa7.84□□□□□ -1.15
SCFD1-220ENST00000556486 J3QLW9 94 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 RAMP3O60896 148 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 ATP5HO75947 161 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 HCKP08631 526 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 ZNF19P17023 458 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 TMEM11P17152 192 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 GZMHP20718 246 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 GLP1RP43220 463 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 SLC35B1P78383 322 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 Q3ZCU0 254 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 CD300EQ496F6 205 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-220ENST00000556486 SLC35E3Q7Z769 313 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 ZNF695Q8IW36 515 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 FOXRED2Q8IWF2 684 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 STPG2Q8N412 459 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 LINC00311Q8N616 119 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 TMEM104Q8NE00 496 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 ALG8Q9BVK2 526 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 ABCG5Q9H222 651 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 IL36GQ9NZH8 169 aa7.83□□□□□ -1.16
SCFD1-220ENST00000556486 NKX1-2Q9UD57 310 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-220ENST00000556486 SERPINE3A8MV23 424 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 SEC14L6B5MCN3 397 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 C15orf65H3BRN8 121 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 AP4M1O00189 453 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 CCRL2O00421 344 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 GABRPO00591 440 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 HSD17B6O14756 317 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 FADS2O95864 444 aaKnown RBP7.82□□□□□ -1.16
SCFD1-220ENST00000556486 IGKV1D-33P01593 117 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 IGKV1-33P01594 117 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 RAB3AP20336 220 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 CHATP28329 748 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 SSTR5P35346 364 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 CDX1P47902 265 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-220ENST00000556486 ALDH3A2P51648 485 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 ZNF137PP52743 207 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 RAB40BQ12829 278 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 DIAPH2-AS1Q14236 149 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 TEX38Q6PEX7 206 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 LINC00596Q86U02 117 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 OR5AK2Q8NH90 309 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 PLPPR1Q8TBJ4 325 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 ST6GALNAC6Q969X2 333 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 GON7Q9BXV9 100 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 ISG20L2Q9H9L3 353 aaKnown RBP7.82□□□□□ -1.16
SCFD1-220ENST00000556486 DHDHQ9UQ10 334 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 ORC6Q9Y5N6 252 aa7.82□□□□□ -1.16
SCFD1-220ENST00000556486 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 IGHV1-3A0A0C4DH29 117 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PTGES3LE9PB15 166 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 E9PI62 339 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 CCL24O00175 119 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 HSPB6O14558 160 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 EI24O14681 340 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 ORC5O43913 435 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 MPZL2O60487 215 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 GAPDHP04406 335 aaKnown RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 GPR12P47775 334 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PCP4P48539 62 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 CFHR3Q02985 330 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 FOXE3Q13461 319 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 HES1Q14469 280 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 KIR2DS1Q14954 304 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 TMEM30BQ3MIR4 351 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PIGYQ3MUY2 71 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 CCDC58Q4VC31 144 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 LHFPL3Q86UP9 236 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 OR8H1Q8NGG4 311 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 OR51A2Q8NGJ7 313 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 OR10X1Q8NGY0 326 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 RHOXF1Q8NHV9 184 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 MRGPRDQ8TDS7 321 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 TNFAIP8L1Q8WVP5 186 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 RGP1Q92546 391 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 NPIPB3Q92617 1050 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 LEAP2Q969E1 77 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 Q96MT0 163 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 OR14A2Q96R54 314 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PDCD1LG2Q9BQ51 273 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 DPCDQ9BVM2 203 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PLSCR3Q9NRY6 295 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 GMPPBQ9Y5P6 360 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 SMAD5-AS1Q9Y6J3 95 aa7.81□□□□□ -1.16
SCFD1-220ENST00000556486 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 PLECQ15149 4684 aaKnown RBP7.81□□□□□ -1.16
SCFD1-220ENST00000556486 TMEM30CPA0ZSE6 113 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms