RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 RNASE10Q5GAN6 216 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM255AQ5JRV8 349 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 VAX1Q5SQQ9 334 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 PHYHD1Q5SRE7 291 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 THEM4Q5T1C6 240 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 AVPI1Q5T686 147 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 UNQ6126/PRO20091Q6UXV3 157 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 IL34Q6ZMJ4 242 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SLC16A14Q7RTX9 510 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LYG2Q86SG7 212 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LRP11Q86VZ4 500 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LYPD6Q86Y78 171 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF584Q8IVC4 421 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SLC38A6Q8IZM9 456 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SPAG16Q8N0X2 631 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LRRC18Q8N456 261 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 BPIFB2Q8N4F0 458 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SLC22A24Q8N4F4 322 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TEX29Q8N6K0 151 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 C3orf56Q8N813 242 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SLC30A7Q8NEW0 376 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM185AQ8NFB2 350 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR51S1Q8NGJ8 323 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR5D14Q8NGL3 314 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR10Z1Q8NGY1 313 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR51F2Q8NH61 342 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CLDND2Q8NHS1 167 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 THAP6Q8TBB0 222 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ABHD5Q8WTS1 349 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 RNF133Q8WVZ7 376 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNRF4Q8WWF5 429 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ST8SIA4Q92187 359 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 RAB1CQ92928 201 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MARC2Q969Z3 335 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MRPL24Q96A35 216 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SAT2Q96F10 170 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CPNE2Q96FN4 548 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SLC25A44Q96H78 314 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ARPC5LQ9BPX5 153 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF416Q9BWM5 594 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MRPL37Q9BZE1 423 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ATG5Q9H1Y0 275 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SYT4Q9H2B2 425 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 RAB18Q9NP72 206 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 HEYLQ9NQ87 328 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM100Q9NV29 134 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MRPL15Q9P015 296 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 OR52A1Q9UKL2 312 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ANAPC10Q9UM13 185 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TRAV14DV4A0A0A6YYC5 116 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TEX13DA0A0J9YY54 714 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM269A0A1B0GVZ9 245 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 C9orf170A2RU37 121 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PRR32B1ATL7 298 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 FTCDNL1E5RQL4 147 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 DCTN6O00399 190 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SPRY3O43610 288 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 NDUFA2O43678 99 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TRAF3IP2O43734 574 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SLC16A7O60669 478 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MPZL1O95297 269 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 IGHG1P01857 330 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 HLA-DQA2P01906 255 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 IFNA6P05013 189 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MSMBP08118 114 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 H2BFMP0C1H6 154 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 CCL2P13500 99 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PAX6P26367 422 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PSMB6P28072 239 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 BDKRB2P30411 391 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 IL2RGP31785 369 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 UCP2P55851 309 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 DHRS2Q13268 280 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 EIF2B1Q14232 305 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MELKQ14680 651 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MICBQ29980 383 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 HFEQ30201 348 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 GFOD2Q3B7J2 385 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PABPC1L2AQ5JQF8 200 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 LY6G6FQ5SQ64 297 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 GLYATL3Q5SZD4 288 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 ATPAF1Q5TC12 328 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 DCAF12L2Q5VW00 463 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 ELP2Q6IA86 826 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 RBMS3Q6XE24 437 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 Q6ZSR3 168 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms