RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
SLIRP-205ENST00000556310 IGHV3-43A0A0B4J1X8 118 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 A0A1W2PPI3 338 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 SHISA3A0PJX4 238 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 IGHV3-43DP0DP04 118 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 BLVRBP30043 206 aaPredicted RBP9.24□□□□□ -0.93
SLIRP-205ENST00000556310 RAB7AP51149 207 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 CLDN12P56749 244 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 C22orf42Q6IC83 251 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 MOB1BQ7L9L4 216 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 C6orf201Q7Z4U5 140 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 OR8H3Q8N146 312 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 PRR18Q8N4B5 295 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 FAM89BQ8N5H3 189 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 OR51D1Q8NGF3 324 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 OR1L1Q8NH94 360 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 PRSS22Q9GZN4 317 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 TAF9BQ9HBM6 251 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 KCNIP1Q9NZI2 227 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 STEAP1Q9UHE8 339 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 CMYA5Q8N3K9 4069 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 WNK1Q9H4A3 2382 aa9.24□□□□□ -0.93
SLIRP-205ENST00000556310 A0A1W2PPE3 182 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 IFITM5A6NNB3 132 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 FOXI3A8MTJ6 420 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-205ENST00000556310 HSD17B6O14756 317 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 TIMM23O14925 209 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 LDLRAD4O15165 306 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 OR2F2O95006 317 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 NAPSAO96009 420 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 RAB3BP20337 219 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 CD24P25063 80 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 IL3RAP26951 378 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-205ENST00000556310 OR10A3P58181 314 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF816Q0VGE8 651 aaPredicted RBP9.23□□□□□ -0.93
SLIRP-205ENST00000556310 HES5Q5TA89 166 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
SLIRP-205ENST00000556310 KLHDC1Q8N7A1 406 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 CAPSLQ8WWF8 208 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 CFHR4Q92496 578 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 SLC25A33Q9BSK2 321 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 JPT1Q9UK76 154 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 HSF4Q9ULV5 492 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 STUB1Q9UNE7 303 aa9.23□□□□□ -0.93
SLIRP-205ENST00000556310 TMEM272A0A1B0GTI8 110 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 FAM90A9PA6NNJ1 464 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 SOCS1O15524 211 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 SNRNP70P08621 437 aaKnown RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 FAM106CPP0CH98 169 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 VAMP1P23763 118 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF137PP52743 207 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 DIAPH2-AS1Q14236 149 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 HABP2Q14520 560 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 HERPUD1Q15011 391 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 HMGN3Q15651 99 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 C2orf76Q3KRA6 126 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 FBLN7Q53RD9 439 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 STEAP3Q658P3 488 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF880Q6PDB4 577 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 THNSL2Q86YJ6 484 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 DRAM1Q8N682 238 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 OR56B1Q8NGI3 324 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 OR10V1Q8NGI7 309 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 RBM14Q96PK6 669 aaKnown RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 RIMS4Q9H426 269 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 CHMP1AQ9HD42 196 aaPredicted RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 SERTAD4Q9NUC0 356 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 PLEKHJ1Q9NW61 149 aa9.22□□□□□ -0.93
SLIRP-205ENST00000556310 TXNL4BQ9NX01 149 aaKnown RBP9.22□□□□□ -0.93
SLIRP-205ENST00000556310 TRBV6-6A0A0A6YYG2 114 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 IGHV1-3A0A0C4DH29 117 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 M0QZ24 198 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 M0QZK8 103 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 SLC31A2O15432 143 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 TXNL1O43396 289 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 GAPDHP04406 335 aaKnown RBP9.21□□□□□ -0.94
SLIRP-205ENST00000556310 VEGFCP49767 419 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 BLCAPP62952 87 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 HTD2P86397 168 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 GNMTQ14749 295 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 NEDD8Q15843 81 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 Q6ZPA2 131 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 Q6ZTK2 550 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 ST6GALNAC6Q969X2 333 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 GALMQ96C23 342 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 C12orf4Q9NQ89 552 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 OR2S2Q9NQN1 319 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 ABRACLQ9P1F3 81 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 AK3Q9UIJ7 227 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 RAB22AQ9UL26 194 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 SSR3Q9UNL2 185 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 MOB4Q9Y3A3 225 aa9.21□□□□□ -0.94
SLIRP-205ENST00000556310 NOTOA8MTQ0 251 aa9.2□□□□□ -0.94
SLIRP-205ENST00000556310 YPEL1O60688 119 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms