RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 KPTNQ9Y664 436 aa3.79□□□□□ -1.8
ATXN3-238ENST00000556288 TET2Q6N021 2002 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 A0A075B6Q4 140 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 A0A0U1RQK1 487 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 A0A1W2PP11 408 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RNASEK-C17orf49H0YIS7 233 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 M0R1W7 72 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 SLC33A1O00400 549 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PDCD5O14737 125 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PIN1P1O15428 100 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF780AO75290 641 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 CSF1P09603 554 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 MGMTP16455 207 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 IGFBP3P17936 291 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PRTN3P24158 256 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 MYL9P24844 172 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 HTR2CP28335 458 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 GLP1RP43220 463 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 OR3A1P47881 315 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RAB13P51153 203 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PRRX1P54821 245 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 CLDN12P56749 244 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZP1P60852 638 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 FABP5Q01469 135 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 BDH1Q02338 343 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 MXD1Q05195 221 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ACSM1Q08AH1 577 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 MLLT11Q13015 90 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 TPBGQ13641 420 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF273Q14593 569 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF146Q15072 292 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RAB11BQ15907 218 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 SSX2Q16385 188 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF260Q3ZCT1 412 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RNLSQ5VYX0 342 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 NCR3LG1Q68D85 454 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 C22orf42Q6IC83 251 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 OR10K2Q6IF99 312 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 Q6P435 159 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 C17orf107Q6ZR85 190 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF367Q7RTV3 350 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PHC2Q8IXK0 858 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 Q8N7P7 452 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 C3orf56Q8N813 242 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 CHST4Q8NCG5 386 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PXT1Q8NFP0 134 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 OR13D1Q8NGV5 346 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 OR4K15Q8NH41 348 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 NDNFQ8TB73 568 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 THRSPQ92748 146 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF714Q96N38 554 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 SSX3Q99909 188 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 FAAP24Q9BTP7 215 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 PPIL3Q9H2H8 161 aaKnown RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 KCNK15Q9H427 330 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 RHOFQ9HBH0 211 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 CHMP1AQ9HD42 196 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 ISYNA1Q9NPH2 558 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 KIF25Q9UIL4 384 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 TRAPPC2LQ9UL33 140 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 LSM2Q9Y333 95 aaKnown RBP3.78□□□□□ -1.8
ATXN3-238ENST00000556288 HILPDAQ9Y5L2 63 aa3.78□□□□□ -1.8
ATXN3-238ENST00000556288 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 TRAV24A0A0B4J272 114 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 A0A1W2PPE3 182 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 ODAMA1E959 279 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 CCRL2O00421 344 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 ZNF737O75373 536 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 GPX5O75715 221 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 FBP1P09467 338 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 IGHV1-8P0DP01 117 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 MMP9P14780 707 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 ARSBP15848 533 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 FUT3P21217 361 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 CDK2P24941 298 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 PSMA1P25786 263 aaKnown RBP3.77□□□□□ -1.81
ATXN3-238ENST00000556288 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-238ENST00000556288 GABRA5P31644 462 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 SAA4P35542 130 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 VEGFCP49767 419 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 GNG10P50151 68 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 PSMD7P51665 324 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 UBE2E1P51965 193 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 P2RX3P56373 397 aa3.77□□□□□ -1.81
ATXN3-238ENST00000556288 RBM11P57052 281 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms