RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TEAD3Q99594 435 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 HSPB9Q9BQS6 159 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 ELOVL1Q9BW60 279 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 TSSK6Q9BXA6 273 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 PBOV1Q9GZY1 135 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 TOLLIPQ9H0E2 274 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 ALX4Q9H161 411 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-236ENST00000556220 RNF167Q9H6Y7 350 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 C8orf4Q9NR00 106 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 PLCXD1Q9NUJ7 323 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATXN3-236ENST00000556220 STUB1Q9UNE7 303 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 COPS3Q9UNS2 423 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
ATXN3-236ENST00000556220 IGHV3-72A0A0B4J1Y9 119 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 KBTBD11-OT1A0A1B0GTJ5 212 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM269A0A1B0GVZ9 245 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 FAM230AA0A1W2PPH8 454 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 FAM90A10PA6NDY2 464 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 NUPR2A6NF83 97 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 E9PI62 339 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 H0Y980 276 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 IFNGP01579 166 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 CDK1P06493 297 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 DBTP11182 482 aaKnown RBP5.21□□□□□ -1.58
ATXN3-236ENST00000556220 SOX6P35712 828 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 GLIPR1P48060 266 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 HSPA13P48723 471 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 CDC42P60953 191 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF85Q03923 595 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 AESQ08117 197 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 GALEQ14376 348 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 TTC23Q5W5X9 447 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 CEMP1Q6PRD7 247 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-236ENST00000556220 AHSA2Q719I0 299 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 MOB3BQ86TA1 216 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 CPOQ8IVL8 374 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 IZUMO1Q8IYV9 350 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 TSPAN14Q8NG11 270 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 OR13F1Q8NGS4 319 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM163Q8TC26 289 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 EMG1Q92979 244 aaKnown RBP5.21□□□□□ -1.58
ATXN3-236ENST00000556220 SLAMF9Q96A28 289 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 MRPS18AQ9NVS2 196 aaKnown RBP5.21□□□□□ -1.58
ATXN3-236ENST00000556220 FAM206AQ9NX38 181 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 TVP23BQ9NYZ1 205 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 PSG11Q9UQ72 335 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 WSB1Q9Y6I7 421 aa5.21□□□□□ -1.58
ATXN3-236ENST00000556220 IGKV1-27A0A075B6S5 117 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 A0A087WW49 117 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 IGHV1-3A0A0C4DH29 117 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ODAMA1E959 279 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CXorf65A6NEN9 183 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 A6NIN4 97 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF729A6NN14 1252 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 MARCH11A6NNE9 402 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 G3V318 75 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 SIRPB1O00241 398 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM127O75204 238 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 MOSP00540 346 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 IGHV3-7P01780 117 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 GAPDHP04406 335 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CGB3P0DN86 165 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CGB7P0DN87 165 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 HOXB6P17509 224 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ALOX5APP20292 161 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CXCR4P61073 352 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 MFGE8Q08431 387 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF816Q0VGE8 651 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 FOXI1Q12951 378 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 INSL4Q14641 139 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CTF1Q16619 201 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 OR2G6Q5TZ20 316 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 LGALS9CQ6DKI2 356 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 DEGS2Q6QHC5 323 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 SLC25A26Q70HW3 274 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 GTSCR1Q86UQ5 136 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 Q8IYB0 196 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 FAM58AQ8N1B3 248 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 OR8H1Q8NGG4 311 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 OR10X1Q8NGY0 326 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 LEAP2Q969E1 77 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 FLYWCH2Q96CP2 140 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CYYR1Q96J86 154 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 OPALINQ96PE5 141 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 THAP7Q9BT49 309 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 PPIL3Q9H2H8 161 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 VCX3BQ9H321 246 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ISG20L2Q9H9L3 353 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ADGRL4Q9HBW9 690 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 ACOT13Q9NPJ3 140 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 CMC2Q9NRP2 79 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 RBFOX1Q9NWB1 397 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 NUFIP1Q9UHK0 495 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 BAIAP2Q9UQB8 552 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms