RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 RAB7AP51149 207 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 ZNF816Q0VGE8 651 aaPredicted RBP12.8□□□□□ -0.36
CHGA-204ENST00000556076 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 THNSL2Q86YJ6 484 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 OR8H3Q8N146 312 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 ZNF439Q8NDP4 499 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 PHF21AQ96BD5 680 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 CST11Q9H112 138 aa12.8□□□□□ -0.36
CHGA-204ENST00000556076 ORC5O43913 435 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 MPIG6BO95866 241 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
CHGA-204ENST00000556076 PF4V1P10720 104 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 PSMD7P51665 324 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 RPS25P62851 125 aaKnown RBP12.79□□□□□ -0.36
CHGA-204ENST00000556076 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 NKAPLQ5M9Q1 402 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 TMEM91Q6ZNR0 172 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 Q6ZPA2 131 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 RTN4IP1Q8WWV3 396 aaPredicted RBP12.79□□□□□ -0.36
CHGA-204ENST00000556076 ST6GALNAC6Q969X2 333 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
CHGA-204ENST00000556076 SULT4A1Q9BR01 284 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 NICN1Q9BSH3 213 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 GNG12Q9UBI6 72 aa12.79□□□□□ -0.36
CHGA-204ENST00000556076 TSSC4Q9Y5U2 329 aaPredicted RBP12.79□□□□□ -0.36
CHGA-204ENST00000556076 PSMB11A5LHX3 300 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 GLAP06280 429 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 CD37P11049 281 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 FUT3P21217 361 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 UBE2UQ5VVX9 321 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 LCNL1Q6ZST4 164 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 GAPTQ8N292 157 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 LINC00311Q8N616 119 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 OR4X2Q8NGF9 303 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 OR52M1Q8NGK5 317 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 OR6M1Q8NGM8 313 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 MRPL30Q8TCC3 161 aaKnown RBP12.78□□□□□ -0.36
CHGA-204ENST00000556076 TAF9BQ9HBM6 251 aa12.78□□□□□ -0.36
CHGA-204ENST00000556076 COL7A1Q02388 2944 aa12.77□□□□□ -0.36
CHGA-204ENST00000556076 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.37
CHGA-204ENST00000556076 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 M0QZK8 103 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 SPINT2O43291 252 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 PDCD6O75340 191 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 CD33P20138 364 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 GALP22466 123 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 HTR2CP28335 458 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 PPP1CCP36873 323 aaKnown RBP12.77□□□□□ -0.37
CHGA-204ENST00000556076 FABP5Q01469 135 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 UNC119Q13432 240 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 FOXB2Q5VYV0 432 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 SLC25A48Q6ZT89 311 aaKnown RBP12.77□□□□□ -0.37
CHGA-204ENST00000556076 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 SPARTQ8N0X7 666 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 Q8N6K4 173 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 KCNG3Q8TAE7 436 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 GFI1Q99684 422 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 RAB9BQ9NP90 201 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 PLSCR3Q9NRY6 295 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 NDUFB11Q9NX14 153 aa12.77□□□□□ -0.37
CHGA-204ENST00000556076 A0A0A6YYD4 124 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 SLC22A1O15245 554 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 CA11O75493 328 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 BPNT1O95861 308 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 PF4P02776 101 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
CHGA-204ENST00000556076 CHATP28329 748 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 EBI3Q14213 229 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 P2RY14Q15391 338 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 ZNF773Q6PK81 442 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
CHGA-204ENST00000556076 AURKAIP1Q9NWT8 199 aaPredicted RBP12.76□□□□□ -0.37
CHGA-204ENST00000556076 TRDV1A0A1B0GX56 115 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 SLC17A2O00624 439 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 PDCD5O14737 125 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 F2RL1P55085 397 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 SSX1Q16384 188 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 CD200R1LQ6Q8B3 271 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 Q8N9W7 124 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 RITA1Q96K30 269 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 TMEM59Q9BXS4 323 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 OR2S2Q9NQN1 319 aa12.75□□□□□ -0.37
CHGA-204ENST00000556076 TRAV1-2A0A0B4J238 106 aa12.74□□□□□ -0.37
CHGA-204ENST00000556076 FGF16O43320 207 aa12.74□□□□□ -0.37
CHGA-204ENST00000556076 IGHG2P01859 326 aa12.74□□□□□ -0.37
CHGA-204ENST00000556076 MYL9P24844 172 aa12.74□□□□□ -0.37
CHGA-204ENST00000556076 PSMB9P28065 219 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms