RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 HOXA5P20719 270 aa12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 MRPL49Q13405 166 aaKnown RBP12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 GFI1BQ5VTD9 330 aa12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 SPNS3Q6ZMD2 512 aa12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 CXorf67Q86X51 503 aaPredicted RBP12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 Q8WTZ3 238 aa12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
PPP4R3A-201ENST00000554308 MKRN2OSH3BPM6 223 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 HSPB6O14558 160 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 SYNGR1O43759 233 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 RND3P61587 244 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 ARL6IP1Q15041 203 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 PPA1Q15181 289 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 STARD4Q96DR4 205 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF488Q96MN9 340 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.42
PPP4R3A-201ENST00000554308 TGIF2-C20orf24A0A0A6YYL0 155 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 AADACP22760 399 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 RAB5CP51148 216 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 IL13RA2Q14627 380 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 C1QL4Q86Z23 238 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 SPACA3Q8IXA5 215 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF383Q8NA42 475 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR4D5Q8NGN0 318 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 EXTL1Q92935 676 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF442Q9H7R0 627 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 DOK5Q9P104 306 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 CHD8Q9HCK8 2581 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 HSD17B6O14756 317 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 SMPD2O60906 423 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 WDR1O75083 606 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 EPHA1P21709 976 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 MAS1LP35410 378 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 TAGLN2P37802 199 aaKnown RBP12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 ERVFRD-1P60508 538 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 PPP1CBP62140 327 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 RUNX1Q01196 453 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 ALKBH6Q3KRA9 238 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 LGI3Q8N145 548 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 LRTM2Q8N967 370 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR5A2Q8NGI9 324 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 PFDN5Q99471 154 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 SUCNR1Q9BXA5 334 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 PROCRQ9UNN8 238 aa12.45□□□□□ -0.42
PPP4R3A-201ENST00000554308 GFRA3O60609 400 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 CST7O76096 145 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 NHLH1Q02575 133 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 ELOBQ15370 118 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 RTL6Q6ICC9 239 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR2C3Q8N628 320 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 TMEM217Q8N7C4 229 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR5P3Q8WZ94 311 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 RHOVQ96L33 236 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 DMRT1Q9Y5R6 373 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 PTPRQQ9UMZ3 2332 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 TRAPPC2LH3BP13 241 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 SSSCA1O60232 199 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 INO80CQ6PI98 192 aaPredicted RBP12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 WDR31Q8NA23 367 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 SLC25A40Q8TBP6 338 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 C11orf1Q9H5F2 150 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 OPA3Q9H6K4 179 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 FZR1Q9UM11 496 aa12.44□□□□□ -0.42
PPP4R3A-201ENST00000554308 SLC34A2O95436 690 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 CDX1P47902 265 aaPredicted RBP12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 UBE2KP61086 200 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 DLK1P80370 383 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 GNMTQ14749 295 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 DAZAP2Q15038 168 aaPredicted RBP12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 C17orf78Q8N4C9 275 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 FAM215AQ9Y5M1 114 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 CADP27708 2225 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 PCNX1Q96RV3 2341 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 PDCD6O75340 191 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 RHBDL1O75783 438 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 CNOT4O95628 575 aaKnown RBP12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 TMEM50AO95807 157 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 SELEP16581 610 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 COX5AP20674 150 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 FUT3P21217 361 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 DTYMKP23919 212 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 ICAM4Q14773 271 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR10D4PQ8NGN7 298 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 MOB3AQ96BX8 217 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 MPC1Q9Y5U8 109 aa12.43□□□□□ -0.42
PPP4R3A-201ENST00000554308 A0A1B0GW64 132 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms