RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 FCAMRQ8WWV6 532 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 SNAPC3Q92966 411 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 LEAP2Q969E1 77 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 CLEC7AQ9BXN2 247 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 BEX2Q9BXY8 128 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 GNG12Q9UBI6 72 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 ANXA10Q9UJ72 324 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 CDC42EP3Q9UKI2 254 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 ANAPC10Q9UM13 185 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 WNK2Q9Y3S1 2297 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 GABARAPH6UMI1 98 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV3-7P01780 117 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 ARG1P05089 322 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 BPIFB3P59826 476 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 DGCR2P98153 550 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 GNMTQ14749 295 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 IGSF11Q5DX21 431 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 RUSC1-AS1Q66K80 236 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 LINC00299Q6ZSB3 139 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 CABLES2Q9BTV7 478 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 KLK11Q9UBX7 282 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 SLC23A1Q9UHI7 598 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 PSG11Q9UQ72 335 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
SHMT2-209ENST00000553949 TRBV6-7A0A0A0MS04 114 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ODF3BA8MYP8 253 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 J3QR06 171 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 TOR1AO14656 332 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 NPFFO15130 113 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 BET1O15155 118 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 HSPA12AO43301 675 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 YPEL1O60688 119 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 RBBP9O75884 186 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 DIRAS3O95661 229 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 CTXN2P0C2S0 81 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 NAT1P18440 290 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZBTB25P24278 435 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 PTBP1P26599 531 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHMT2-209ENST00000553949 RCVRNP35243 200 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 PPP1CCP36873 323 aaKnown RBP9.96□□□□□ -0.82
SHMT2-209ENST00000553949 CEACAM6P40199 344 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 GNG10P50151 68 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 PRRX1P54821 245 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF79Q15937 498 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 Q3ZCU0 254 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 CHRFAM7AQ494W8 412 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 MORN2Q502X0 79 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 MIDNQ504T8 468 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 PYDC2Q56P42 97 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF626Q68DY1 528 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF439Q8NDP4 499 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 BEND2Q8NDZ0 799 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF596Q8TC21 504 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 YPEL2Q96QA6 119 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 OR1A1Q9P1Q5 309 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF69Q9UC07 566 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
SHMT2-209ENST00000553949 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 A0A1W2PPE3 182 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 GSTZ1O43708 216 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-209ENST00000553949 RGS11O94810 467 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 SRD5A1P18405 259 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 SAA4P35542 130 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 LGALS4P56470 323 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 ARPC4P59998 168 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 ACTBP60709 375 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 ACTG1P63261 375 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 LY6G6FQ5SQ64 297 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 C9orf139Q6ZV77 190 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 LYSMD2Q8IV50 215 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 OR4P4Q8NGL7 312 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 OR10J5Q8NHC4 309 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-209ENST00000553949 ZNRD1Q9P1U0 126 aa9.95□□□□□ -0.82
SHMT2-209ENST00000553949 RBMX2Q9Y388 322 aaKnown RBP9.95□□□□□ -0.82
SHMT2-209ENST00000553949 SOX21Q9Y651 276 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-209ENST00000553949 SONP18583 2426 aaKnown RBP9.94□□□□□ -0.82
SHMT2-209ENST00000553949 SLC31A2O15432 143 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 CRLF1O75462 422 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 EPHA1P21709 976 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 HLA-DMAP28067 261 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF134P52741 427 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 TAS2R46P59540 309 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF45Q02386 682 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 SSBP1Q04837 148 aaKnown RBP9.94□□□□□ -0.82
SHMT2-209ENST00000553949 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
SHMT2-209ENST00000553949 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms