RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RAB3CQ96E17 227 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 ZNF747Q9BV97 191 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 RIMS4Q9H426 269 aaPredicted RBP18.71■□□□□ 0.59
NEK9-203ENST00000553945 OR2S2Q9NQN1 319 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 HMGN3Q15651 99 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 Q6ZPA2 131 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 OR52L2PQ8NGH6 319 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 OR10R2Q8NGX6 335 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 LINC01006Q8NI28 216 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 PTX4Q96A99 478 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 ATG5Q9H1Y0 275 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 ABRACLQ9P1F3 81 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 RNF114Q9Y508 228 aa18.7■□□□□ 0.58
NEK9-203ENST00000553945 METTL21EPA6NDL7 271 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 TSPAN9O75954 239 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 SNRPBP14678 240 aaKnown RBP18.69■□□□□ 0.58
NEK9-203ENST00000553945 DIAPH2-AS1Q14236 149 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 GNMTQ14749 295 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 ZNF880Q6PDB4 577 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 MOB1BQ7L9L4 216 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 LINC00311Q8N616 119 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 C8orf31Q8N9H6 132 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 OR4C13Q8NGP0 309 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 GALMQ96C23 342 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 CMSS1Q9BQ75 279 aaKnown RBP18.69■□□□□ 0.58
NEK9-203ENST00000553945 OCSTAMPQ9BR26 566 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 C16orf95Q9H693 158 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 C12orf4Q9NQ89 552 aa18.69■□□□□ 0.58
NEK9-203ENST00000553945 A0A075B6Q4 140 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 TRBV6-6A0A0A6YYG2 114 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 SLC31A2O15432 143 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 SMIM18P0DKX4 95 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 TGFBR1P36897 503 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 RAB7AP51149 207 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 LSM3P62310 102 aaKnown RBP18.68■□□□□ 0.58
NEK9-203ENST00000553945 HTD2P86397 168 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 Q3ZCU0 254 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 ZNF439Q8NDP4 499 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 IL1F10Q8WWZ1 152 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 NPFFR1Q9GZQ6 430 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 JPT1Q9UK76 154 aa18.68■□□□□ 0.58
NEK9-203ENST00000553945 TIMM23O14925 209 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 CD3GP09693 182 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 GNB3P16520 340 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 IL3RAP26951 378 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 PPP1CCP36873 323 aaKnown RBP18.67■□□□□ 0.58
NEK9-203ENST00000553945 MRPS15P82914 257 aaKnown RBP18.67■□□□□ 0.58
NEK9-203ENST00000553945 MORN2Q502X0 79 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 CT45A1Q5HYN5 189 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 IDNKQ5T6J7 187 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 CT45A3Q8NHU0 189 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 LGALS14Q8TCE9 139 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 CAPSLQ8WWF8 208 aa18.67■□□□□ 0.58
NEK9-203ENST00000553945 A0A1W2PPI3 338 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 RAB27BO00194 218 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 HSD17B6O14756 317 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 HIST1H1DP16402 221 aaKnown RBP18.66■□□□□ 0.58
NEK9-203ENST00000553945 REG1BP48304 166 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 ZNF134P52741 427 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 SHISA2Q6UWI4 295 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 SLC25A48Q6ZT89 311 aaKnown RBP18.66■□□□□ 0.58
NEK9-203ENST00000553945 OR8H3Q8N146 312 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 DRAM1Q8N682 238 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 OR56B4Q8NH76 319 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 RANBP3Q9H6Z4 567 aaPredicted RBP18.66■□□□□ 0.58
NEK9-203ENST00000553945 Q9N2K0 584 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 KCNK7Q9Y2U2 307 aa18.66■□□□□ 0.58
NEK9-203ENST00000553945 GAPDHP04406 335 aaKnown RBP18.65■□□□□ 0.58
NEK9-203ENST00000553945 KIR2DS4P43632 304 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 HLA-DRB3P79483 266 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 WFDC12Q8WWY7 111 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 FUNDC2Q9BWH2 189 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 MGAT4AQ9UM21 535 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 SIGLEC9Q9Y336 463 aa18.65■□□□□ 0.58
NEK9-203ENST00000553945 MFNGO00587 321 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 RGS11O94810 467 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 FAM106CPP0CH98 169 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 PROK1P58294 105 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 ZNF816Q0VGE8 651 aaPredicted RBP18.64■□□□□ 0.57
NEK9-203ENST00000553945 FBLN7Q53RD9 439 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 STEAP3Q658P3 488 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 MOB3BQ86TA1 216 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 OR13F1Q8NGS4 319 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 CFHR4Q92496 578 aa18.64■□□□□ 0.57
NEK9-203ENST00000553945 YPEL1O60688 119 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 SNRNP70P08621 437 aaKnown RBP18.63■□□□□ 0.57
NEK9-203ENST00000553945 SRSF4Q08170 494 aaKnown RBP18.63■□□□□ 0.57
NEK9-203ENST00000553945 ARFRP1Q13795 201 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 C16orf82Q7Z2V1 217 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 LYG1Q8N1E2 194 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 OR5H6Q8NGV6 325 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 OR2T6Q8NHC8 308 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 RTN4IP1Q8WWV3 396 aaPredicted RBP18.63■□□□□ 0.57
NEK9-203ENST00000553945 ST6GALNAC6Q969X2 333 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 YPEL2Q96QA6 119 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 SLC25A33Q9BSK2 321 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 ABHD14AQ9BUJ0 271 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 MRPS26Q9BYN8 205 aaKnown RBP18.63■□□□□ 0.57
NEK9-203ENST00000553945 RHBDL2Q9NX52 303 aa18.63■□□□□ 0.57
NEK9-203ENST00000553945 ETV7Q9Y603 341 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms