RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SVILO95425 2214 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 USF3Q68DE3 2245 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 H0YL77 283 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 TXNL1O43396 289 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 ACAA1P09110 424 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 CD59P13987 128 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 Q6P435 159 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 SCCPDHQ8NBX0 429 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 GTF3AQ92664 365 aaKnown RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 RSG1Q9BU20 258 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 PCNX2A6NKB5 2137 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 J3QT63 122 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 CEBPDP49716 269 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-211ENST00000553882 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
ACTN1-211ENST00000553882 PMP22Q01453 160 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 TESK1Q15569 626 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF561Q8N587 486 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 IL22RA2Q969J5 263 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 DMXL1Q9Y485 3027 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 H3BQ15 152 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 IFNA4P05014 189 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 AGAP20933 346 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 RNF212Q495C1 297 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF880Q6PDB4 577 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 FAM180AQ6UWF9 173 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 PKIBQ9C010 78 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
ACTN1-211ENST00000553882 TRBV6-6A0A0A6YYG2 114 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 C5orf52A6NGY3 159 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 LYZL6O75951 148 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 OR2C1O95371 312 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 GRPP07492 148 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 RPL23AP62750 156 aaKnown RBP12.33□□□□□ -0.44
ACTN1-211ENST00000553882 FABP9Q0Z7S8 132 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 HNF4GQ14541 408 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 CXorf67Q86X51 503 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-211ENST00000553882 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
ACTN1-211ENST00000553882 WDYHV1Q96HA8 205 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 OR14J1Q9UGF5 321 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 TRGV5A0A0B4J1U4 118 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 A0A1B0GU03 582 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 KIAA1324LA8MWY0 1029 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-211ENST00000553882 NXPH2O95156 264 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 TAS2R30P59541 319 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 ARG2P78540 354 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 ICAM4Q14773 271 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 TBC1D28Q2M2D7 210 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-211ENST00000553882 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 RTL8AQ9BWD3 113 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 GP6Q9HCN6 339 aa12.33□□□□□ -0.44
ACTN1-211ENST00000553882 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-211ENST00000553882 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 A0A1B0GW64 132 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-211ENST00000553882 IGKV1-5P01602 117 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
ACTN1-211ENST00000553882 MMP9P14780 707 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 CD46P15529 392 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-211ENST00000553882 URGCP-MRPS24S4R325 110 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 SMPD2O60906 423 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 SCAF4O95104 1147 aaKnown RBP12.32□□□□□ -0.44
ACTN1-211ENST00000553882 IFNA5P01569 189 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 CEACAM6P40199 344 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 PPP1CBP62140 327 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 TLE4Q04727 773 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 ARL16Q0P5N6 197 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 HES3Q5TGS1 186 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 GNG13Q9P2W3 67 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
ACTN1-211ENST00000553882 SYNGR2O43760 224 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 NQO2P16083 231 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 TAGLN2P37802 199 aaKnown RBP12.31□□□□□ -0.44
ACTN1-211ENST00000553882 OR2B11Q5JQS5 317 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 FER1L6-AS2Q96M78 137 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 BTBD17A6NE02 478 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 TFF1P04155 84 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF806P0C7X5 589 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 SP9P0CG40 484 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
ACTN1-211ENST00000553882 UBE2KP61086 200 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 OR8G1Q15617 311 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF585BQ52M93 769 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF766Q5HY98 468 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 CLDND2Q8NHS1 167 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms