RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ZNF676Q8N7Q3 588 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ST6GALNAC3Q8NDV1 305 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ATP6V1C2Q8NEY4 427 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 SLC26A10Q8NG04 563 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR4M2Q8NGB6 313 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR4A4PQ8NGN8 299 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR9Q1Q8NGQ5 310 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR6N2Q8NGY6 317 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR10A6Q8NH74 314 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR2AE1Q8NHA4 323 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 GNPDA2Q8TDQ7 276 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 DCAKDQ8WVC6 231 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C1orf54Q8WWF1 131 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR5P2Q8WZ92 322 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 SLC25A46Q96AG3 418 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CPNE2Q96FN4 548 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 PYURFQ96I23 114 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 Q96MT0 163 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR5B12Q96R08 314 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 FMO2Q99518 471 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 PHB2Q99623 299 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 MICU1Q9BPX6 476 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 AIF1LQ9BQI0 150 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 PLA2G12AQ9BZM1 189 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CHST5Q9GZS9 411 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 NXF2Q9GZY0 626 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 MFSD1Q9H3U5 465 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 TMEM27Q9HBJ8 222 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 LRTM1Q9HBL6 345 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 IKZF2Q9UKS7 526 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ANGPT4Q9Y264 503 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 FARSAQ9Y285 508 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 SLC17A4Q9Y2C5 497 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 SLC35A3Q9Y2D2 325 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 UTP11Q9Y3A2 253 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 UFC1Q9Y3C8 167 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 V9GYY9 64 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 UNC13BO14795 1591 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 NRKQ7Z2Y5 1582 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 DNAH12Q6ZR08 3092 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ITPR3Q14573 2671 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 USP24Q9UPU5 2620 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C9orf84Q5VXU9 1444 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CD109Q6YHK3 1445 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 FGD6Q6ZV73 1430 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 SMG6Q86US8 1419 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 RIMS2Q9UQ26 1411 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 TRAPPC8Q9Y2L5 1435 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 MYOM1P52179 1685 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 RTL1A6NKG5 1358 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 MED23Q9ULK4 1368 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 SEC16AO15027 2179 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 SHROOM2Q13796 1616 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 BIVM-ERCC5R4GMW8 1640 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A0A0B4J2E0 115 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A0A1B0GX12 115 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A0A1W2PRD5 423 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A0A1W2PRF3 423 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A0A1W2PRM7 423 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 CCDC160A6NGH7 325 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 CENPXA8MT69 81 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 A8MWP6 167 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 FTCDNL1E5RQL4 147 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 H7C2Y5 167 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 H7C417 338 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 M0R3G1 203 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 KCNK1O00180 336 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 GPR31O00270 319 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 COPEO14579 308 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 TCF21O43680 179 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 MPZL2O60487 215 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 GGCTO75223 188 aaKnown RBP1.48□□□□□ -2.17
VRK1-202ENST00000553683 OR2B3O76000 313 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 TNFSF15O95150 251 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 MT-CO2P00403 227 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 PDYNP01213 254 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 TACSTD2P09758 323 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 LIPCP11150 499 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 CYBAP13498 195 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 HIST1H1BP16401 226 aaKnown RBP1.48□□□□□ -2.17
VRK1-202ENST00000553683 ALOX5APP20292 161 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 COL8A2P25067 703 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 RFC3P40938 356 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 GCLMP48507 274 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 CRISP1P54107 249 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 RAB2AP61019 212 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 MAXP61244 160 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 PKIAP61925 76 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 RRAS2P62070 204 aaPredicted RBP1.48□□□□□ -2.17
VRK1-202ENST00000553683 RPS15AP62244 130 aaKnown RBP1.48□□□□□ -2.17
VRK1-202ENST00000553683 TBPL1P62380 186 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 GNG3P63215 75 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 ECH1Q13011 328 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 BIKQ13323 160 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 QPRTQ15274 297 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 SURF2Q15527 256 aaPredicted RBP1.48□□□□□ -2.17
VRK1-202ENST00000553683 MAPK14Q16539 360 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 CDNFQ49AH0 187 aa1.48□□□□□ -2.17
VRK1-202ENST00000553683 PYCR3Q53H96 274 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms