RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CDS1Q92903 461 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 CIDECQ96AQ7 238 aaPredicted RBP3.3□□□□□ -1.88
PCNX1-205ENST00000553508 DDIT4LQ96D03 193 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 ZNF355PQ9NSJ1 428 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 PYCARDQ9ULZ3 195 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 SLC35A3Q9Y2D2 325 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 NOSIPQ9Y314 301 aaKnown RBP3.3□□□□□ -1.88
PCNX1-205ENST00000553508 HDGFL3Q9Y3E1 203 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 PKD1L1Q8TDX9 2849 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 NOTCH1P46531 2555 aa3.3□□□□□ -1.88
PCNX1-205ENST00000553508 HEATR5AQ86XA9 2040 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 IGHV3-15A0A0B4J1V0 119 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SERTM2A0A1B0GWG4 89 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 DPRXA6NFQ7 191 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SNTNA6NMZ2 147 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 LSM1O15116 133 aaKnown RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 PLIN3O60664 434 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 GUSBP08236 651 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 LINC00032P0C843 101 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SRP14P37108 136 aaKnown RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 FOXA1P55317 472 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SEC61GP60059 68 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 UBE2NP61088 152 aaKnown RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SLC35A1P78382 337 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 BST1Q10588 318 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SKP2Q13309 424 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 IL18Q14116 193 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 PGGHGQ32M88 737 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 PDZK1Q5T2W1 519 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 HES5Q5TA89 166 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 TMPPEQ6ZT21 453 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 GRINAQ7Z429 371 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 CLHC1Q8NHS4 586 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 TWIST2Q8WVJ9 160 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 MCUR1Q96AQ8 359 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SGK3Q96BR1 496 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 ARL5BQ96KC2 179 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SLC35G5Q96KT7 338 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 RBM14Q96PK6 669 aaKnown RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 ZNF317Q96PQ6 595 aaPredicted RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 ULBP2Q9BZM5 246 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 ROPN1BQ9BZX4 212 aaPredicted RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 RPRD1BQ9NQG5 326 aaKnown RBP3.29□□□□□ -1.88
PCNX1-205ENST00000553508 ACER3Q9NUN7 267 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 SLC2A8Q9NY64 477 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 FIS1Q9Y3D6 152 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 TGP01266 2768 aa3.29□□□□□ -1.88
PCNX1-205ENST00000553508 IGKV1D-13A0A0B4J2D9 117 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 SMIM23A6NLE4 172 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 E7EQL1 145 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 ATP6V1G2-DDX39BF2Z307 99 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 BOLA2-SMG1P6H3BVE0 249 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 TCF21O43680 179 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 TIMM8AO60220 97 aaPredicted RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 RAMP3O60896 148 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 H6PDO95479 791 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 CD8AP01732 235 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 UBTFL6P0CB48 400 aaPredicted RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 IGKV1-13P0DP09 117 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 GTF2E2P29084 291 aaKnown RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 POLR2HP52434 150 aaKnown RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 OR2B6P58173 313 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 COPZ1P61923 177 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 ZNF141Q15928 474 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 GABRA6Q16445 453 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 PRSS8Q16651 343 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 SPANXN2Q5MJ10 180 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 RIMKLAQ8IXN7 391 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 RIBC1Q8N443 379 aaPredicted RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 MREGQ8N565 214 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 TRIML2Q8N7C3 387 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 KCNG3Q8TAE7 436 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 C10orf105Q8TEF2 133 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 ZMYND19Q96E35 227 aaPredicted RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 OR7D2Q96RA2 312 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 SDF2Q99470 211 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 C1orf50Q9BV19 199 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 TAPBPLQ9BX59 468 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 RAB1BQ9H0U4 201 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 ARMC7Q9H6L4 198 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 NEK6Q9HC98 313 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 DYNLRB1Q9NP97 96 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 CHTOPQ9Y3Y2 248 aaKnown RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 DNAJC15Q9Y5T4 150 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 NPTNQ9Y639 398 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 ZNF469Q96JG9 3925 aaPredicted RBP3.28□□□□□ -1.88
PCNX1-205ENST00000553508 FREM1Q5H8C1 2179 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 PRR14LQ5THK1 2151 aa3.28□□□□□ -1.88
PCNX1-205ENST00000553508 CR1P17927 2039 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 ALPK2Q86TB3 2170 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 A0A096LNT2 108 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 A0A096LPI6 279 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 C9JVG2 144 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 H0YHG0 523 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 FAAHO00519 579 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 SCN2BO60939 215 aa3.27□□□□□ -1.89
PCNX1-205ENST00000553508 GAPDHP04406 335 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms