RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 IFNL4K9M1U5 179 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF250P15622 560 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 HERVK_113P61574 105 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 C1orf185Q5T7R7 199 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 OR2J1Q9GZK6 312 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-208ENST00000553289 HSF4Q9ULV5 492 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PPIAL4AQ9Y536 164 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 BCL2P10415 239 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 COL10A1Q03692 680 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 AESQ08117 197 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 CEBPEQ15744 281 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 RIPPLY2Q5TAB7 128 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF441Q8N8Z8 693 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 ISOC2Q96AB3 205 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 PKIBQ9C010 78 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 NAGKQ9UJ70 344 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 OR51B2Q9Y5P1 312 aa10.02□□□□□ -0.8
SYNE2-208ENST00000553289 BMPR1BO00238 502 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 KRTCAP3Q53RY4 240 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 FAM214BQ7L5A3 538 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 SAXO1Q8IYX7 474 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 ABHD14AQ9BUJ0 271 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 SLC25A10Q9UBX3 287 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-208ENST00000553289 CLN8Q9UBY8 286 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 IL19Q9UHD0 177 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.02□□□□□ -0.81
SYNE2-208ENST00000553289 CD1BP29016 333 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 OR10J1P30954 320 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF343Q6P1L6 599 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 POM121Q96HA1 1249 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 SRD5A3Q9H8P0 318 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 MIA3Q5JRA6 1907 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 MFSD2BA6NFX1 497 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 NPIPB13A6NJU9 1138 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 FAM157AC9JC47 383 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 NPIPB4C9JG80 1138 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 K7N7A8 449 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 PRSS1P07477 247 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 COX5BP10606 129 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 UCP2P55851 309 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 FAM3BP58499 235 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-208ENST00000553289 TFF2Q03403 129 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 OR8I2Q8N0Y5 310 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 AQP3Q92482 292 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 OR2V2Q96R30 315 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 HDHD3Q9BSH5 251 aaPredicted RBP10.02□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM208Q9BTX3 173 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 RSRP1Q9BUV0 290 aa10.02□□□□□ -0.81
SYNE2-208ENST00000553289 AHRRA9YTQ3 701 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 FAM90A26D6RGX4 464 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 PRF1P14222 555 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 MC5RP33032 325 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 RPL31P62899 125 aaKnown RBP10.01□□□□□ -0.81
SYNE2-208ENST00000553289 GAMTQ14353 236 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 UNQ9370/PRO34162Q6UXP9 181 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 CORTO00230 105 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 G0S2P27469 103 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 RFLNBQ8N5W9 214 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 ADIPOR1Q96A54 375 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 PRO1933Q9H354 126 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 TUBD1Q9UJT1 453 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 CBY3A6NI87 242 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 IGHMP01871 453 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 IGLV3-21P80748 117 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-208ENST00000553289 LILRB1Q8NHL6 650 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-208ENST00000553289 DYRK2Q92630 601 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
SYNE2-208ENST00000553289 NRIP2Q9BQI9 281 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 COL4A1P02462 1669 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 PPP1CCP36873 323 aaKnown RBP10.01□□□□□ -0.81
SYNE2-208ENST00000553289 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 SELENOTP62341 195 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 RTP5Q14D33 572 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 NCMAPQ5T1S8 102 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 FHL5Q5TD97 284 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 Q6ZN92 141 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM252Q8N6L7 170 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 CTHRC1Q96CG8 243 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 SNX22Q96L94 193 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 MSL2Q9HCI7 577 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 TUBGCP6Q96RT7 1819 aa10.01□□□□□ -0.81
SYNE2-208ENST00000553289 CXCL2P19875 107 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 SRP14P37108 136 aaKnown RBP10□□□□□ -0.81
SYNE2-208ENST00000553289 VWA1Q6PCB0 445 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF645Q8N7E2 425 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 FUT9Q9Y231 359 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 WASHC3Q9Y3C0 194 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 PRR33A8MZF0 331 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 TCL1AP56279 114 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM30BQ3MIR4 351 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms