RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 E9PI62 339 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 NBR2O15453 112 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
RAB5C-209ENST00000552162 SOX2P48431 317 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 SLC25A30Q5SVS4 291 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 MEDAGQ5VYS4 303 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 HAPLN4Q86UW8 402 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 RITA1Q96K30 269 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 OR4C12Q96R67 309 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 MYCBPQ99417 103 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-209ENST00000552162 ZNF251Q9BRH9 671 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-209ENST00000552162 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 AP4S1Q9Y587 144 aa12.58□□□□□ -0.4
RAB5C-209ENST00000552162 A0A1W2PN81 502 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 SOX15O60248 233 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 HBZP02008 142 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 FCGR1AP12314 374 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 ZNF93P35789 620 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 CHRNA7P36544 502 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 SNRPGP62308 76 aaKnown RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 C5orf64Q2M2E5 130 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 C6orf183Q5T699 404 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 SYT6Q5T7P8 510 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 Q8N1Y9 231 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 OR4K15Q8NH41 348 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 OR1L1Q8NH94 360 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 S100A13Q99584 98 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 MRPL20Q9BYC9 149 aaKnown RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 CST11Q9H112 138 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
RAB5C-209ENST00000552162 PAK1IP1Q9NWT1 392 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-209ENST00000552162 A0A1W2PP11 408 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 A8MZ25 164 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 HSPA12AO43301 675 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 CD2P06729 351 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 NDPQ00604 133 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 C19orf54Q5BKX5 351 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 STEAP3Q658P3 488 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 LIN54Q6MZP7 749 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 SPATA25Q9BR10 227 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 FOXA2Q9Y261 457 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-209ENST00000552162 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
RAB5C-209ENST00000552162 SAC3D1A6NKF1 404 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 ZNF780AO75290 641 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-209ENST00000552162 JTBO76095 146 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 GTF2F2P13984 249 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 GBX2P52951 348 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-209ENST00000552162 PPP3R1P63098 170 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 NPBQ8NG41 125 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 TMEM106AQ96A25 262 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 OR2S2Q9NQN1 319 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 ETAA1Q9NY74 926 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 RCC2Q9P258 522 aaKnown RBP12.55□□□□□ -0.4
RAB5C-209ENST00000552162 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 AASSQ9UDR5 926 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
RAB5C-209ENST00000552162 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 NDUFA3O95167 84 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 IGLV1-51P01701 117 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 GTF2A1P52655 376 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 CRIP2P52943 208 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 ADARB1P78563 741 aaKnown RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 GNMTQ14749 295 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 MORN2Q502X0 79 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 GPR148Q8TDV2 347 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 CENPNQ96H22 339 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-209ENST00000552162 NABP2Q9BQ15 211 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 RSRP1Q9BUV0 290 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 SPACA1Q9HBV2 294 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 STUB1Q9UNE7 303 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 A3GALT2U3KPV4 340 aa12.54□□□□□ -0.4
RAB5C-209ENST00000552162 FADS2O95864 444 aaKnown RBP12.53□□□□□ -0.4
RAB5C-209ENST00000552162 HSPB1P04792 205 aaKnown RBP12.53□□□□□ -0.4
RAB5C-209ENST00000552162 BDKRB2P30411 391 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 RAB12Q6IQ22 244 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 GAPTQ8N292 157 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
RAB5C-209ENST00000552162 ELOVL1Q9BW60 279 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms