RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 C1orf123Q9NWV4 160 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 RDH8Q9NYR8 311 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 PTTG3PQ9NZH4 202 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 CCDC167Q9P0B6 97 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 MBD2Q9UBB5 411 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 ABCD2Q9UBJ2 740 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 CD300AQ9UGN4 299 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 LAMP5Q9UJQ1 280 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 RHBDD3Q9Y3P4 386 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 LRP1BQ9NZR2 4599 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 PKD1P98161 4303 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 DNAH6Q9C0G6 4158 aa1.78□□□□□ -2.12
CPSF6-207ENST00000551516 IGKV1-27A0A075B6S5 117 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 IGHV3OR15-7A0A075B7D8 119 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 UQCRHLA0A096LP55 91 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 IGHV3-16A0A0C4DH30 117 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TRBV7-9A0A0J9YWB2 115 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1B0GTI1 187 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1B0GVI7 797 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1W2PRG6 482 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ISPDA4D126 451 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RNF222A6NCQ9 220 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 FBLL1A6NHQ2 334 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 A6NIZ1 184 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RPL37AP8A6NKH3 93 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TRPC5OSA6NMA1 111 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 EPM2AB3EWF7 344 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 KPNA4O00629 521 aaPredicted RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 NME4O00746 187 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CDIPTO14735 213 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ANGPT2O15123 496 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ANGPTL7O43827 346 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TIMM8AO60220 97 aaPredicted RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SLC16A7O60669 478 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SERPINB7O75635 380 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 FBP1P09467 338 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 IGHV1-8P0DP01 117 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 H2AFXP16104 143 aaPredicted RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CD34P28906 385 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 MAGEA2P43356 314 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SRP9P49458 86 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 VEGFCP49767 419 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 GSK3BP49841 420 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 DAP3P51398 398 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ARHGDIAP52565 204 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SLC25A1P53007 311 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RAP1BP61224 184 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 PCBD1P61457 104 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RAP1AP62834 184 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 HPCAP84074 193 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 EMX1Q04741 257 aaPredicted RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CD300CQ08708 224 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SCRN3Q0VDG4 424 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CRMP1Q14194 572 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 EBI3Q14213 229 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RFX4Q33E94 735 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CYBRD1Q53TN4 286 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 COQ5Q5HYK3 327 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF506Q5JVG8 444 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF684Q5T5D7 378 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 LINC00242Q5T6M2 205 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SLX4IPQ5VYV7 408 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF343Q6P1L6 599 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 C1orf94Q6P1W5 598 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 BTNL3Q6UXE8 466 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 IL34Q6ZMJ4 242 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF497Q6ZNH5 498 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TRPM8Q7Z2W7 1104 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 NANOGNBQ7Z5D8 188 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CEACAM19Q7Z692 300 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SBSPONQ8IVN8 264 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CSNK1G2-AS1Q8NCQ2 148 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 BHLHE23Q8NDY6 225 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TMEM104Q8NE00 496 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 MNS1Q8NEH6 495 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 OR56B2PQ8NGI1 322 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 OR4P4Q8NGL7 312 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 OR10Z1Q8NGY1 313 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 OR2AE1Q8NHA4 323 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RNF133Q8WVZ7 376 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 AQP3Q92482 292 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RAB3CQ96E17 227 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RBMXL1Q96E39 390 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 DUS3LQ96G46 650 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 CYYR1Q96J86 154 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 PLEKHA8Q96JA3 519 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 RBP7Q96R05 134 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 NMNAT3Q96T66 252 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TM2D3Q9BRN9 247 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 PARD6BQ9BYG5 372 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 HDHD2Q9H0R4 259 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ANKRD19PQ9H560 264 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 ARMC7Q9H6L4 198 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 METTL8Q9H825 291 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 AMBNQ9NP70 447 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 PALMDQ9NP74 551 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 SAR1AQ9NR31 198 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 TNFRSF19Q9NS68 423 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 UFSP2Q9NUQ7 469 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 VNN3Q9NY84 501 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms