RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TMEM65Q6PI78 240 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF554Q86TJ5 538 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF429Q86V71 674 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 CDH26Q8IXH8 852 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 C10orf67Q8IYJ2 551 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 ETAA1Q9NY74 926 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 CKLFQ9UBR5 152 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
PTCH1-221ENST00000550914 LYSTQ99698 3801 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
PTCH1-221ENST00000550914 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
PTCH1-221ENST00000550914 TRBV5-5A0A0J9YX44 114 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 A0A1W2PP11 408 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 IRGMA1A4Y4 181 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 IGLV1-40P01703 118 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 HLA-DRB1P01911 266 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 FSTP19883 344 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 ETV1P50549 477 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 KIAA0141Q14154 515 aaPredicted RBP10□□□□□ -0.81
PTCH1-221ENST00000550914 MMDQ15546 238 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 LY6G6FQ5SQ64 297 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 RAB12Q6IQ22 244 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 OR1N2Q8NGR9 330 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 APH1BQ8WW43 257 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 BABAM2Q9NXR7 383 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
PTCH1-221ENST00000550914 SLC2A2P11168 524 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-221ENST00000550914 Q499Y3 187 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 MORN2Q502X0 79 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 YIF1BQ5BJH7 314 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 FAM27D1Q5T7N8 215 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR2G6Q5TZ20 316 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR4K15Q8NH41 348 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR1L1Q8NH94 360 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 GHSRQ92847 366 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 RDH12Q96NR8 316 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 SLC29A1Q99808 456 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 ASCL2Q99929 193 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 KLK15Q9H2R5 256 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 GNB4Q9HAV0 340 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 OR2S2Q9NQN1 319 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 MBNL3Q9NUK0 354 aaKnown RBP9.99□□□□□ -0.81
PTCH1-221ENST00000550914 MRPS28Q9Y2Q9 187 aaKnown RBP9.99□□□□□ -0.81
PTCH1-221ENST00000550914 PEX16Q9Y5Y5 336 aa9.99□□□□□ -0.81
PTCH1-221ENST00000550914 ATP6V0E1O15342 81 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 LY86O95711 162 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 MYL12AP19105 171 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 FUT3P21217 361 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 MYF6P23409 242 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 RAB9AP51151 201 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 ACTBP60709 375 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 RPS11P62280 158 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 HTD2P86397 168 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 DMKNQ6E0U4 476 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 GLIPR1L1Q6UWM5 242 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 PRR18Q8N4B5 295 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 MINDY2Q8NBR6 621 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 MUL1Q969V5 352 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 ORAI1Q96D31 301 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 ABHD14AQ9BUJ0 271 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 TAF9BQ9HBM6 251 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 KCNIP1Q9NZI2 227 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 DIMT1Q9UNQ2 313 aaKnown RBP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 EXOSC1Q9Y3B2 195 aaKnown RBP9.98□□□□□ -0.81
PTCH1-221ENST00000550914 LRRC42Q9Y546 428 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
PTCH1-221ENST00000550914 TRAV8-7A0A075B6U6 113 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 IGHV7-81A0A0B4J1V7 117 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 G3V318 75 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 OVOL1O14753 267 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 NBR2O15453 112 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 YPEL1O60688 119 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 RGS11O94810 467 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 NDUFA3O95167 84 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 LALBAP00709 142 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 MGMTP16455 207 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-221ENST00000550914 GNB1P62873 340 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 ADARB1P78563 741 aaKnown RBP9.97□□□□□ -0.81
PTCH1-221ENST00000550914 MED21Q13503 144 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 SMN1Q16637 294 aaKnown RBP9.97□□□□□ -0.81
PTCH1-221ENST00000550914 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 JAGN1Q8N5M9 183 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 NPBQ8NG41 125 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 OR13C5Q8NGS8 318 aa9.97□□□□□ -0.81
PTCH1-221ENST00000550914 Q96M66 194 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms