RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ELANEP08246 267 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 GNAO1P09471 354 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR5H8P0DN80 308 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 GPR12P47775 334 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 THBS3P49746 956 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 HTD2P86397 168 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 ACSM3Q53FZ2 586 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 CT45A1Q5HYN5 189 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 CXorf66Q5JRM2 361 aaPredicted RBP8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 C10orf99Q6UWK7 81 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR2W3Q7Z3T1 314 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF695Q8IW36 515 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 MRPL41Q8IXM3 137 aaKnown RBP8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF439Q8NDP4 499 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 TMEM104Q8NE00 496 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 CT45A3Q8NHU0 189 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 TFAP2CQ92754 450 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 GALMQ96C23 342 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 NOL4LQ96MY1 436 aaPredicted RBP8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 S1PR3Q99500 378 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 GHITMQ9H3K2 345 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 BANF2Q9H503 90 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 DCLRE1BQ9H816 532 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 TAF9BQ9HBM6 251 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 JPT1Q9UK76 154 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGHV3-43A0A0B4J1X8 118 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 IGHV3-72A0A0B4J1Y9 119 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 ERICH4A6NGS2 130 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 YPEL1O60688 119 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 BPNT1O95861 308 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 MPIG6BO95866 241 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 CDK1P06493 297 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 IGHV3-43DP0DP04 118 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 RCC1P18754 421 aaPredicted RBP8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 SRMP19623 302 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 SOX6P35712 828 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZNF134P52741 427 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 EGFEM1PQ0D2K5 195 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 FOXE3Q13461 319 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 SPHARQ15513 63 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 MORN2Q502X0 79 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 LAIR2Q6ISS4 152 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 Q8N9W7 124 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR1L1Q8NH94 360 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 YPEL2Q96QA6 119 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 RIMS4Q9H426 269 aaPredicted RBP8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 PLSCR3Q9NRY6 295 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 ABRACLQ9P1F3 81 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 STEAP1Q9UHE8 339 aa8.58□□□□□ -1.04
VTI1BP3-201ENST00000550220 UBE2QL1A1L167 161 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 IGF1P05019 195 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 VDAC1P21796 283 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 GABPB1Q06547 395 aaPredicted RBP8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 KIR2DS1Q14954 304 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 TRAM1Q15629 374 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 HSD17B12Q53GQ0 312 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 C1orf100Q5SVJ3 147 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 C6orf141Q5SZD1 244 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 SIGIRRQ6IA17 410 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 KLHL30-AS1Q8NEE0 82 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR10V1Q8NGI7 309 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR8U1Q8NH10 309 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 UBALD1Q8TB05 177 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 FAM46BQ96A09 425 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 ABHD14AQ9BUJ0 271 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 TMEM59Q9BXS4 323 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 MGAT4AQ9UM21 535 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 TPRKBQ9Y3C4 175 aa8.57□□□□□ -1.04
VTI1BP3-201ENST00000550220 CCL24O00175 119 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 SLC31A2O15432 143 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 CD37P11049 281 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 PSMA1P25786 263 aaKnown RBP8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 HTR2CP28335 458 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 VHLP40337 213 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 PSMD7P51665 324 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 RPS27AP62979 156 aaKnown RBP8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 LSAMPQ13449 338 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 MED22Q15528 200 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 RBM48Q5RL73 367 aaKnown RBP8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 FAM71F2Q6NXP2 309 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 MOB1BQ7L9L4 216 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 CEACAM19Q7Z692 300 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 FAM71E2Q8N5Q1 922 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR2AK2Q8NG84 335 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR6M1Q8NGM8 313 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 MRPL30Q8TCC3 161 aaKnown RBP8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 UFD1Q92890 307 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 P2RX4Q99571 388 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZNF251Q9BRH9 671 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 URM1Q9BTM9 101 aaKnown RBP8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 TMED9Q9BVK6 235 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms