RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 FUT3P21217 361 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 SLC6A1P30531 599 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 MYCNOSP40205 109 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 SLC35B1P78383 322 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 MRPL30Q8TCC3 161 aaKnown RBP10.56□□□□□ -0.72
GCN1-206ENST00000549815 S1PR3Q99500 378 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 TAF9BQ9HBM6 251 aa10.56□□□□□ -0.72
GCN1-206ENST00000549815 RYR3Q15413 4870 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 AP4M1O00189 453 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 PDCD6O75340 191 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 CRTAPO75718 401 aaPredicted RBP10.55□□□□□ -0.72
GCN1-206ENST00000549815 CDK1P06493 297 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 CD37P11049 281 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 MAPK3P27361 379 aaPredicted RBP10.55□□□□□ -0.72
GCN1-206ENST00000549815 F2RL1P55085 397 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 CFHR3Q02985 330 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 MORN2Q502X0 79 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 FAM27D1Q5T7N8 215 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 STEAP3Q658P3 488 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 LRRTM1Q86UE6 522 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 PRR18Q8N4B5 295 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 RNF152Q8N8N0 203 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 OR51D1Q8NGF3 324 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 THRSPQ92748 146 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 HSPB9Q9BQS6 159 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 GNG12Q9UBI6 72 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 GHRLQ9UBU3 117 aa10.55□□□□□ -0.72
GCN1-206ENST00000549815 LSM2Q9Y333 95 aaKnown RBP10.55□□□□□ -0.72
GCN1-206ENST00000549815 H0YHG0 523 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 LANCL1O43813 399 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 VSIG8P0DPA2 414 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
GCN1-206ENST00000549815 LSAMPQ13449 338 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 GPR50Q13585 617 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 GNMTQ14749 295 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 PNLIPRP3Q17RR3 467 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 ACSM3Q53FZ2 586 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 C1orf100Q5SVJ3 147 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 TEX38Q6PEX7 206 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 OR8H1Q8NGG4 311 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 OR52L2PQ8NGH6 319 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 FAM46BQ96A09 425 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 OR2S2Q9NQN1 319 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 JPT1Q9UK76 154 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 ERGIC3Q9Y282 383 aa10.54□□□□□ -0.72
GCN1-206ENST00000549815 YPEL1O60688 119 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 RPLP1P05386 114 aaKnown RBP10.53□□□□□ -0.72
GCN1-206ENST00000549815 UBBP0CG47 229 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 CHATP28329 748 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 HTD2P86397 168 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
GCN1-206ENST00000549815 IRF3Q14653 427 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 LY6G6FQ5SQ64 297 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 OR10K2Q6IF99 312 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 LCNL1Q6ZST4 164 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 MS4A15Q8N5U1 240 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 DUX3Q96PT4 197 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 YPEL2Q96QA6 119 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 RASL11BQ9BPW5 248 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 ABHD14AQ9BUJ0 271 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 CST11Q9H112 138 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 DCLRE1BQ9H816 532 aa10.53□□□□□ -0.72
GCN1-206ENST00000549815 NUDT19A8MXV4 375 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 IGF1P05019 195 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.73
GCN1-206ENST00000549815 RPS27AP62979 156 aaKnown RBP10.52□□□□□ -0.73
GCN1-206ENST00000549815 QRFPP83859 136 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 UNC119Q13432 240 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 FOXE3Q13461 319 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 HMGN3Q15651 99 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 ZNF880Q6PDB4 577 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 RITA1Q96K30 269 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 NABP2Q9BQ15 211 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 MCRIP2Q9BUT9 160 aaKnown RBP10.52□□□□□ -0.73
GCN1-206ENST00000549815 MND1Q9BWT6 205 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.73
GCN1-206ENST00000549815 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.73
GCN1-206ENST00000549815 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
GCN1-206ENST00000549815 A0A0A6YYD4 124 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 TMEM14DPA8MWL7 114 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 ANKRD65E5RJM6 399 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 PTGES3LE9PB15 166 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 CCL24O00175 119 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 SLC22A1O15245 554 aa10.51□□□□□ -0.73
GCN1-206ENST00000549815 IGHG4P01861 327 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms