RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 OR52M1Q8NGK5 317 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 OR4A4PQ8NGN8 299 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 OR52I2Q8NH67 350 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 C15orf40Q8WUR7 153 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 BEX2Q9BXY8 128 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 A0A087X0M5 115 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 A0A1B0GX30 115 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 GNG10P50151 68 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 HTD2P86397 168 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 DGCR2P98153 550 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 TEX29Q8N6K0 151 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 SNAPC3Q92966 411 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 CLEC7AQ9BXN2 247 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 OR1A1Q9P1Q5 309 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 ZNRD1Q9P1U0 126 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 SLC23A1Q9UHI7 598 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 CDC42EP3Q9UKI2 254 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 NUP50Q9UKX7 468 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 SULT1C2O00338 296 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 CD34P28906 385 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 PPP1CCP36873 323 aaKnown RBP17.26■□□□□ 0.35
VPS29-206ENST00000549578 TMEM30BQ3MIR4 351 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 SPANXN2Q5MJ10 180 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 OR11H6Q8NGC7 330 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 RABL2AQ9UBK7 228 aaPredicted RBP17.26■□□□□ 0.35
VPS29-206ENST00000549578 KLK11Q9UBX7 282 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 ZNF69Q9UC07 566 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 ANXA10Q9UJ72 324 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 JPT1Q9UK76 154 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 ANAPC10Q9UM13 185 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 RABL2BQ9UNT1 228 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 PSG11Q9UQ72 335 aa17.26■□□□□ 0.35
VPS29-206ENST00000549578 SOX21Q9Y651 276 aaPredicted RBP17.26■□□□□ 0.35
VPS29-206ENST00000549578 NAV3Q8IVL0 2385 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 MXRA5Q9NR99 2828 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 A0A1W2PPE3 182 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 BET1O15155 118 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 ARG1P05089 322 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 FCAMRQ8WWV6 532 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 C22orf15Q8WYQ4 148 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
VPS29-206ENST00000549578 ODF3BA8MYP8 253 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 GABARAPH6UMI1 98 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 NPFFO15130 113 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 HSPA12AO43301 675 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 ETV6P41212 452 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 ZNF79Q15937 498 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 MORN2Q502X0 79 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 STEAP3Q658P3 488 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 ZNF626Q68DY1 528 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 OR9G1Q8NH87 305 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
VPS29-206ENST00000549578 CTDSPLO15194 276 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 ZBTB25P24278 435 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 SAA4P35542 130 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 ARPC4P59998 168 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 MRPS10P82664 201 aaKnown RBP17.23■□□□□ 0.35
VPS29-206ENST00000549578 CHRFAM7AQ494W8 412 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 BCL6BQ8N143 479 aaPredicted RBP17.23■□□□□ 0.35
VPS29-206ENST00000549578 MS4A7Q9GZW8 240 aaPredicted RBP17.23■□□□□ 0.35
VPS29-206ENST00000549578 PARP12Q9H0J9 701 aaKnown RBP17.23■□□□□ 0.35
VPS29-206ENST00000549578 MTFP1Q9UDX5 166 aa17.23■□□□□ 0.35
VPS29-206ENST00000549578 TRBV6-7A0A0A0MS04 114 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 J3QR06 171 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 TOR1AO14656 332 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 SLC31A2O15432 143 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 YPEL1O60688 119 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 IGLV1-47P01700 117 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 SRD5A1P18405 259 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 NAT1P18440 290 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 EPHA1P21709 976 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 RCVRNP35243 200 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 CEACAM6P40199 344 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 PYDC2Q56P42 97 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 ZNF439Q8NDP4 499 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 OR4P4Q8NGL7 312 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 YPEL2Q96QA6 119 aa17.22■□□□□ 0.35
VPS29-206ENST00000549578 RBBP9O75884 186 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 HLA-DMAP28067 261 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 ZNF134P52741 427 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 MIDNQ504T8 468 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 LDLRAD2Q5SZI1 272 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 LHFPL4Q7Z7J7 247 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 OR10J5Q8NHC4 309 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 ZNF596Q8TC21 504 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 C17orf50Q8WW18 174 aa17.21■□□□□ 0.35
VPS29-206ENST00000549578 A0A0U1RQK1 487 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 CRLF1O75462 422 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 RGS11O94810 467 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 PTBP1P26599 531 aaKnown RBP eCLIP17.21■□□□□ 0.34
VPS29-206ENST00000549578 PRRX1P54821 245 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 LGALS4P56470 323 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 HLA-DRB5Q30154 266 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 CT45A1Q5HYN5 189 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 LYSMD2Q8IV50 215 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 BEND2Q8NDZ0 799 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 OR5AP2Q8NGF4 316 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 CT45A3Q8NHU0 189 aa17.21■□□□□ 0.34
VPS29-206ENST00000549578 GINS4Q9BRT9 223 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms