RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 H0Y980 276 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 SLC31A2O15432 143 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 ZNF780AO75290 641 aaPredicted RBP13.03□□□□□ -0.32
VPS29-204ENST00000548259 MT-ND4P03905 459 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 CD2P06729 351 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 VHLP40337 213 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 CT45A1Q5HYN5 189 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 ZNF660Q6AZW8 331 aaPredicted RBP13.03□□□□□ -0.32
VPS29-204ENST00000548259 ASCL4Q6XD76 172 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 GTSCR1Q86UQ5 136 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 CT45A3Q8NHU0 189 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 CIB1Q99828 191 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 ANKRD60Q9BZ19 345 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
VPS29-204ENST00000548259 MCRIP1C9JLW8 97 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
VPS29-204ENST00000548259 GYG2O15488 501 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 IGLV1-51P01701 117 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 T-ENOLP0DO92 83 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 FASP25445 335 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 PLGLAQ15195 96 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 ZNF439Q8NDP4 499 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 ABHD5Q8WTS1 349 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 POMPQ9Y244 141 aa13.02□□□□□ -0.33
VPS29-204ENST00000548259 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 C12orf77C9JDV5 145 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 SLC25A17O43808 307 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 CDRT1O95170 752 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 GTF2F2P13984 249 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 ZP3P21754 424 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 PPP3R1P63098 170 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 HAGHQ16775 308 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
VPS29-204ENST00000548259 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 SYS1Q8N2H4 156 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 CCDC197Q8NCU1 140 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 GABARAPL3Q9BY60 117 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 SLA2Q9H6Q3 261 aa13.01□□□□□ -0.33
VPS29-204ENST00000548259 HBZP02008 142 aa13□□□□□ -0.33
VPS29-204ENST00000548259 SERPINA2P20848 420 aa13□□□□□ -0.33
VPS29-204ENST00000548259 ZNF134P52741 427 aa13□□□□□ -0.33
VPS29-204ENST00000548259 CRIP2P52943 208 aaPredicted RBP13□□□□□ -0.33
VPS29-204ENST00000548259 GBX2P52951 348 aaPredicted RBP13□□□□□ -0.33
VPS29-204ENST00000548259 RAB40BQ12829 278 aa13□□□□□ -0.33
VPS29-204ENST00000548259 GPR176Q14439 515 aa13□□□□□ -0.33
VPS29-204ENST00000548259 NPBQ8NG41 125 aa13□□□□□ -0.33
VPS29-204ENST00000548259 OR51A2Q8NGJ7 313 aa13□□□□□ -0.33
VPS29-204ENST00000548259 ABHD14AQ9BUJ0 271 aa13□□□□□ -0.33
VPS29-204ENST00000548259 ALG8Q9BVK2 526 aa13□□□□□ -0.33
VPS29-204ENST00000548259 TMED9Q9BVK6 235 aa13□□□□□ -0.33
VPS29-204ENST00000548259 TMEM138Q9NPI0 162 aa13□□□□□ -0.33
VPS29-204ENST00000548259 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
VPS29-204ENST00000548259 TPSG1Q9NRR2 321 aa13□□□□□ -0.33
VPS29-204ENST00000548259 ETAA1Q9NY74 926 aa13□□□□□ -0.33
VPS29-204ENST00000548259 KCNIP1Q9NZI2 227 aa13□□□□□ -0.33
VPS29-204ENST00000548259 A3GALT2U3KPV4 340 aa13□□□□□ -0.33
VPS29-204ENST00000548259 J3QRE1 110 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 RGS11O94810 467 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 IGHV3-11P01762 117 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 FCGR1AP12314 374 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 ZNF93P35789 620 aaPredicted RBP12.99□□□□□ -0.33
VPS29-204ENST00000548259 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
VPS29-204ENST00000548259 TPPP2P59282 170 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 ZNF529Q6P280 563 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 PDCD1LG2Q9BQ51 273 aa12.99□□□□□ -0.33
VPS29-204ENST00000548259 RANGRFQ9HD47 186 aaPredicted RBP12.99□□□□□ -0.33
VPS29-204ENST00000548259 CA11O75493 328 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 NDUFA3O95167 84 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 CNTFRP26992 372 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 SOX2P48431 317 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 GYS2P54840 703 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 SLC25A30Q5SVS4 291 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 DDI2Q5TDH0 399 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 LCN12Q6JVE5 192 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 CD200R1LQ6Q8B3 271 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 OR4K15Q8NH41 348 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 OR1L1Q8NH94 360 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 GPR148Q8TDV2 347 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 NABP2Q9BQ15 211 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
VPS29-204ENST00000548259 TAS2R4Q9NYW5 299 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
VPS29-204ENST00000548259 SOX15O60248 233 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 CX3CL1P78423 397 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 LRRC36Q1X8D7 754 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 SLC22A6Q4U2R8 563 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 MORN2Q502X0 79 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 AKIRIN2Q53H80 203 aa12.97□□□□□ -0.33
VPS29-204ENST00000548259 C19orf54Q5BKX5 351 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms