RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PSG11Q9UQ72 335 aa18.86■□□□□ 0.61
SMARCD1-203ENST00000547247 C2CD3Q4AC94 2353 aa18.86■□□□□ 0.61
SMARCD1-203ENST00000547247 MEIOCA2RUB1 952 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 ODF3BA8MYP8 253 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 TOR1AO14656 332 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 FABP7O15540 132 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 IGHV3-7P01780 117 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 TNFSF8P32971 234 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 SAA4P35542 130 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 CBX5P45973 191 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 UTF1Q5T230 341 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 STEAP3Q658P3 488 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 BCL6BQ8N143 479 aaPredicted RBP18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 OR4A4PQ8NGN8 299 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 ZNF596Q8TC21 504 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 C15orf40Q8WUR7 153 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 GCDHQ92947 438 aaPredicted RBP18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 LEAP2Q969E1 77 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 PRRX1P54821 245 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 Q3ZCU0 254 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 OR52L2PQ8NGH6 319 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 OR10V1Q8NGI7 309 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 MXRA5Q9NR99 2828 aa18.85■□□□□ 0.61
SMARCD1-203ENST00000547247 IGLV1-47P01700 117 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 GSTT2P0CG29 244 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 GSTT2BP0CG30 244 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 GNG10P50151 68 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 FAM53AQ6NSI3 398 aaPredicted RBP18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 GVQW1Q8N7I0 195 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 BEND2Q8NDZ0 799 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 SCPEP1Q9HB40 452 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 RABL2AQ9UBK7 228 aaPredicted RBP18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 RABL2BQ9UNT1 228 aa18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 TBL2Q9Y4P3 447 aaKnown RBP18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 SOX21Q9Y651 276 aaPredicted RBP18.84■□□□□ 0.61
SMARCD1-203ENST00000547247 IGKV1D-8A0A087WSZ0 117 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 J3QR06 171 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 HSPA12AO43301 675 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 YPEL1O60688 119 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 MORN2Q502X0 79 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 YPEL2Q96QA6 119 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 IFT46Q9NQC8 304 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 SLC23A1Q9UHI7 598 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 FAM96BQ9Y3D0 163 aa18.83■□□□□ 0.6
SMARCD1-203ENST00000547247 MEIS3P1A6NDR6 274 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 SULT1C2O00338 296 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 RGS11O94810 467 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 LPLP06858 475 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 ZBTB25P24278 435 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 PPP1CCP36873 323 aaKnown RBP18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 IL18Q14116 193 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 GNMTQ14749 295 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 HERPUD1Q15011 391 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 HLA-DRB5Q30154 266 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 HOGA1Q86XE5 327 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 C8orf31Q8N9H6 132 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 BEST4Q8NFU0 473 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 OR4P4Q8NGL7 312 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 GPX8Q8TED1 209 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 ABHD1Q96SE0 405 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 MMP28Q9H239 520 aa18.82■□□□□ 0.6
SMARCD1-203ENST00000547247 IGKV1-6A0A0C4DH72 117 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 A0A0U1RQK1 487 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 DIRAS3O95661 229 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 CNPY1Q3B7I2 92 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 IGSF11Q5DX21 431 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 MINOS1Q5TGZ0 78 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 PYHIN1Q6K0P9 492 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 SLC6A7Q99884 636 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 CABLES2Q9BTV7 478 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 OCEL1Q9H607 264 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 ANXA10Q9UJ72 324 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 MINOS1-NBL1R4GNA1 71 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 FABP12A6NFH5 140 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 BET1O15155 118 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 HTR1DP28221 377 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 CEACAM6P40199 344 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 DEFB112Q30KQ8 113 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 LY6G6FQ5SQ64 297 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 LHFPL4Q7Z7J7 247 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 ZNF439Q8NDP4 499 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 CREB3L1Q96BA8 519 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 OR1A1Q9P1Q5 309 aa18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 AMMECR1Q9Y4X0 333 aaPredicted RBP18.81■□□□□ 0.6
SMARCD1-203ENST00000547247 A0A1W2PPE3 182 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 FCER2P06734 321 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 FBP1P09467 338 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 CTXN2P0C2S0 81 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 TUSC1Q2TAM9 212 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 LINC00311Q8N616 119 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 OR6Q1Q8NGQ2 317 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 OR10X1Q8NGY0 326 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 OR10J5Q8NHC4 309 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 MALSU1Q96EH3 234 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 ZNRD1Q9P1U0 126 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 DPM3Q9P2X0 92 aa18.8■□□□□ 0.6
SMARCD1-203ENST00000547247 TRBV6-7A0A0A0MS04 114 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 BUB1B-PAK6H3BSN5 160 aa18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 MRPS10P82664 201 aaKnown RBP18.79■□□□□ 0.6
SMARCD1-203ENST00000547247 LDLRAD2Q5SZI1 272 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms